中国科学院计算技术研究所机构知识库

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	Validation Methods of Peptide Identification Results in Proteomics* 期刊论文 PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125 作者:  Zhou Wen-Jing;  Zeng Wen-Feng;  Chi Hao;  He Si-Min 收藏  |  浏览/下载：12/0  |  提交时间：2023/12/04 proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods
	Validation Methods of Peptide Identification Results in Proteomics br 期刊论文 PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125 作者:  Zhou, Wen-Jing;  Zeng, Wen-Feng;  Chi, Hao;  He, Si-Min 收藏  |  浏览/下载：28/0  |  提交时间：2023/12/04 proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods
	Recent Progress in Chemical Cross-linking Coupled With Mass Spectrometry 期刊论文 PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2022, 卷号: 49, 期号: 4, 页码: 737-758 作者:  Chen Zhen-Lin;  Cao Yong;  He Si-Min 收藏  |  浏览/下载：22/0  |  提交时间：2022/12/07 cross-linking mass spectrometry  protein structure  protein interaction  proteomics  mass spectrometry
	Null-free False Discovery Rate Control Using Decoy Permutations 期刊论文 ACTA MATHEMATICAE APPLICATAE SINICA-ENGLISH SERIES, 2022, 卷号: 38, 期号: 2, 页码: 235-253 作者:  He, Kun;  Li, Meng-jie;  Fu, Yan;  Gong, Fu-zhou;  Sun, Xiao-ming 收藏  |  浏览/下载：27/0  |  提交时间：2022/12/07 multiple testing  false discovery rate  null distribution-free  p-value-free  decoy permutations  knockoff filter
	Radiosensitivity-Specific Proteomic and Signaling Pathway Network of Non-Small Cell Lung Cancer (NSCLC) 期刊论文 INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, 2022, 卷号: 112, 期号: 2, 页码: 529-541 作者:  Zhu, Xueru;  Wang, Yiting;  Jiang, Chang;  Li, Xiaoyang;  Sun, Linying;  Wang, Guangzhong;  Fu, Xiaolong 收藏  |  浏览/下载：26/0  |  提交时间：2022/12/07
	pValid 2: A deep learning based validation method for peptide identification in shotgun proteomics with increased discriminating power 期刊论文 JOURNAL OF PROTEOMICS, 2022, 卷号: 251, 页码: 9 作者:  Zhou, Wen-Jing;  Wei, Zhuo-Hong;  He, Si-Min;  Chi, Hao 收藏  |  浏览/下载：36/0  |  提交时间：2022/06/21 Proteomics  Tandem mass spectrometry  Retention time  Validation method  Deep learning
	O-GlcNAcylation Quantification Based on Electron-Transfer/Higher-Energy Collisional Dissociation and Its Application in O-GlcNAcylation Site Mapping of Liver Proteomics in High Fat Diet-fed Mice 期刊论文 CHINESE JOURNAL OF ANALYTICAL CHEMISTRY, 2021, 卷号: 49, 期号: 12, 页码: 11 作者:  Shao Wen-Ya;  Liang Yu;  Liu Jian-Xi;  Liu Hong-Tao;  Wang Zhao-Wei;  Sui Zhi-Gang;  Zhao Bao-Feng;  Zhang Xiao-Dan;  Liang Zhen;  Zhang Li-Hua;  Zhang Yu-Kui 收藏  |  浏览/下载：22/0  |  提交时间：2022/12/07 O-linked beta-N-acetylglucosaminylation  Quantitative proteomics  Electron transfer/higher energy collision dissociation
	Single-cell Long Non-coding RNA Landscape of T Cells in Human Cancer Immunity 期刊论文 GENOMICS PROTEOMICS & BIOINFORMATICS, 2021, 卷号: 19, 期号: 3, 页码: 377-393 作者:  Luo, Haitao;  Bu, Dechao;  Shao, Lijuan;  Li, Yang;  Sun, Liang;  Wang, Ce;  Wang, Jing;  Yang, Wei;  Yang, Xiaofei;  Dong, Jun;  Zhao, Yi;  Li, Furong 收藏  |  浏览/下载：27/0  |  提交时间：2022/12/07 Long non-coding RNA  Transcriptome assembly  Metacell  Immune regulation  Functional annotation
	Prediction and analysis of multiple protein lysine modified sites based on conditional wasserstein generative adversarial networks 期刊论文 BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: 1, 页码: 17 作者:  Yang, Yingxi;  Wang, Hui;  Li, Wen;  Wang, Xiaobo;  Wei, Shizhao;  Liu, Yulong;  Xu, Yan 收藏  |  浏览/下载：42/0  |  提交时间：2021/12/01 Post-translational modification  Deep learning  Generative adversarial networks  Random forest
	Open-pFind Verified Four Missing Proteins from Multi-Tissues 期刊论文 JOURNAL OF PROTEOME RESEARCH, 2020, 卷号: 19, 期号: 12, 页码: 4808-4814 作者:  Wu, Shujia;  Sun, Jinshuai;  Wang, Xi;  Xu, Feng;  Chi, Hao;  Li, Yanchang;  Zhong, Bowen;  Xie, Yuping;  Yan, Zhonghua;  Chang, Lei;  Wang, Dongxue;  He, Fuchu;  Wu, Junzhu;  Zhang, Yao;  Xu, Ping 收藏  |  浏览/下载：44/0  |  提交时间：2021/12/01 Chromosome-Centric Human Proteome Project  missing proteins  open-pFind  multiple tissues