中国科学院计算技术研究所机构知识库

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	Validation Methods of Peptide Identification Results in Proteomics* 期刊论文 PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125 作者:  Zhou Wen-Jing;  Zeng Wen-Feng;  Chi Hao;  He Si-Min 收藏  |  浏览/下载：6/0  |  提交时间：2023/12/04 proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods
	Validation Methods of Peptide Identification Results in Proteomics br 期刊论文 PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125 作者:  Zhou, Wen-Jing;  Zeng, Wen-Feng;  Chi, Hao;  He, Si-Min 收藏  |  浏览/下载：19/0  |  提交时间：2023/12/04 proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods
	A universal database reduction method based on the sequence tag strategy to facilitate large-scale database search in proteomics 期刊论文 INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2023, 卷号: 483, 页码: 11 作者:  Wang, Kai-Fei;  Wu, Yu-Zhuo;  Chi, Hao 收藏  |  浏览/下载：10/0  |  提交时间：2023/07/12
	pValid 2: A deep learning based validation method for peptide identification in shotgun proteomics with increased discriminating power 期刊论文 JOURNAL OF PROTEOMICS, 2022, 卷号: 251, 页码: 9 作者:  Zhou, Wen-Jing;  Wei, Zhuo-Hong;  He, Si-Min;  Chi, Hao 收藏  |  浏览/下载：27/0  |  提交时间：2022/06/21 Proteomics  Tandem mass spectrometry  Retention time  Validation method  Deep learning
	pDeepXL: MS/MS Spectrum Prediction for Cross-Linked Peptide Pairs by Deep Learning 期刊论文 JOURNAL OF PROTEOME RESEARCH, 2021, 卷号: 20, 期号: 5, 页码: 2570-2582 作者:  Chen, Zhen-Lin;  Mao, Peng-Zhi;  Zeng, Wen-Feng;  Chi, Hao;  He, Si-Min 收藏  |  浏览/下载：34/0  |  提交时间：2021/12/01 cross-linking mass spectrometry  spectrum prediction  deep learning  transfer learning  online fine-tuning
	Exploring the Microbiome-Wide Lysine Acetylation, Succinylation, and Propionylation in Human Gut Microbiota 期刊论文 ANALYTICAL CHEMISTRY, 2021, 卷号: 93, 期号: 17, 页码: 6594-6598 作者:  Zhang, Xu;  Cheng, Kai;  Ning, Zhibin;  Mayne, Janice;  Walker, Krystal;  Chi, Hao;  Farnsworth, Charles L.;  Lee, Kimberly;  Figeys, Daniel 收藏  |  浏览/下载：35/0  |  提交时间：2021/12/01
	Open-pFind Verified Four Missing Proteins from Multi-Tissues 期刊论文 JOURNAL OF PROTEOME RESEARCH, 2020, 卷号: 19, 期号: 12, 页码: 4808-4814 作者:  Wu, Shujia;  Sun, Jinshuai;  Wang, Xi;  Xu, Feng;  Chi, Hao;  Li, Yanchang;  Zhong, Bowen;  Xie, Yuping;  Yan, Zhonghua;  Chang, Lei;  Wang, Dongxue;  He, Fuchu;  Wu, Junzhu;  Zhang, Yao;  Xu, Ping 收藏  |  浏览/下载：35/0  |  提交时间：2021/12/01 Chromosome-Centric Human Proteome Project  missing proteins  open-pFind  multiple tissues
	GameTag: A New Sequence Tag Generation Algorithm Based on Cooperative Game Theory 期刊论文 PROTEOMICS, 2020, 页码: 9 作者:  Fei, Zhengcong;  Wang, Kaifei;  Chi, Hao 收藏  |  浏览/下载：48/0  |  提交时间：2020/12/10 cooperative game  deep learning  proteomics  sequence tag generation
	N-glycopeptide Signatures of IgA(2) in Serum from Patients with Hepatitis B Virus-related Liver Diseases 期刊论文 MOLECULAR & CELLULAR PROTEOMICS, 2019, 卷号: 18, 期号: 11, 页码: 2262-2272 作者:  Zhang, Shu;  Cao, Xinyi;  Liu, Chao;  Li, Wei;  Zeng, Wenfeng;  Li, Baiwen;  Chi, Hao;  Liu, Mingqi;  Qin, Xue;  Tang, Lingyi;  Yan, Guoquan;  Ge, Zefan;  Liu, Yinkun;  Gao, Qiang;  Lu, Haojie 收藏  |  浏览/下载：49/0  |  提交时间：2020/12/10
	MS/MS Spectrum Prediction for Modified Peptides Using pDeep2 Trained by Transfer Learning 期刊论文 ANALYTICAL CHEMISTRY, 2019, 卷号: 91, 期号: 15, 页码: 9724-9731 作者:  Zeng, Wen-Feng;  Zhou, Xie-Xuan;  Zhou, Wen-Jing;  Chi, Hao;  Zhan, Jianfeng;  He, Si-Min 收藏  |  浏览/下载：73/0  |  提交时间：2019/12/10