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DeePMD-kit v3: A Multiple-Backend Framework for Machine Learning Potentials 期刊论文
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2025, 卷号: 21, 期号: 9, 页码: 4375-4385
作者:  Zeng, Jinzhe;  Zhang, Duo;  Peng, Anyang;  Zhang, Xiangyu;  He, Sensen;  Wang, Yan;  Liu, Xinzijian;  Bi, Hangrui;  Li, Yifan;  Cai, Chun;  Zhang, Chengqian;  Du, Yiming;  Zhu, Jia-Xin;  Mo, Pinghui;  Huang, Zhengtao;  Zeng, Qiyu;  Shi, Shaochen;  Qin, Xuejian;  Yu, Zhaoxi;  Luo, Chenxing;  Ding, Ye;  Liu, Yun-Pei;  Shi, Ruosong;  Wang, Zhenyu;  Bore, Sigbjorn Loland;  Chang, Junhan;  Deng, Zhe;  Ding, Zhaohan;  Han, Siyuan;  Jiang, Wanrun;  Ke, Guolin;  Liu, Zhaoqing;  Lu, Denghui;  Muraoka, Koki;  Oliaei, Hananeh;  Singh, Anurag Kumar;  Que, Haohui;  Xu, Weihong;  Xu, Zhangmancang;  Zhuang, Yong-Bin;  Dai, Jiayu;  Giese, Timothy J.;  Jia, Weile;  Xu, Ben;  York, Darrin M.;  Zhang, Linfeng;  Wang, Han
收藏  |  浏览/下载：5/0  |  提交时间：2025/06/25
Resistive memory-based zero-shot liquid state machine for multimodal event data learning 期刊论文
NATURE COMPUTATIONAL SCIENCE, 2025, 卷号: 5, 期号: 1, 页码: 37-47
作者:  Lin, Ning;  Wang, Shaocong;  Li, Yi;  Wang, Bo;  Shi, Shuhui;  He, Yangu;  Zhang, Woyu;  Yu, Yifei;  Zhang, Yue;  Zhang, Xinyuan;  Wong, Kwunhang;  Wang, Songqi;  Chen, Xiaoming;  Jiang, Hao;  Zhang, Xumeng;  Lin, Peng;  Xu, Xiaoxin;  Qi, Xiaojuan;  Wang, Zhongrui;  Shang, Dashan;  Liu, Qi;  Liu, Ming
收藏  |  浏览/下载：6/0  |  提交时间：2025/06/25
DPA-2: a large atomic model as a multi-task learner 期刊论文
NPJ COMPUTATIONAL MATERIALS, 2024, 卷号: 10, 期号: 1, 页码: 15
作者:  Zhang, Duo;  Liu, Xinzijian;  Zhang, Xiangyu;  Zhang, Chengqian;  Cai, Chun;  Bi, Hangrui;  Du, Yiming;  Qin, Xuejian;  Peng, Anyang;  Huang, Jiameng;  Li, Bowen;  Shan, Yifan;  Zeng, Jinzhe;  Zhang, Yuzhi;  Liu, Siyuan;  Li, Yifan;  Chang, Junhan;  Wang, Xinyan;  Zhou, Shuo;  Liu, Jianchuan;  Luo, Xiaoshan;  Wang, Zhenyu;  Jiang, Wanrun;  Wu, Jing;  Yang, Yudi;  Yang, Jiyuan;  Yang, Manyi;  Gong, Fu-Qiang;  Zhang, Linshuang;  Shi, Mengchao;  Dai, Fu-Zhi;  York, Darrin M.;  Liu, Shi;  Zhu, Tong;  Zhong, Zhicheng;  Lv, Jian;  Cheng, Jun;  Jia, Weile;  Chen, Mohan;  Ke, Guolin;  Weinan, E.;  Zhang, Linfeng;  Wang, Han
收藏  |  浏览/下载：7/0  |  提交时间：2025/06/25
Two-stage deep neural network for diagnosing fungal keratitis via in vivo confocal microscopy images 期刊论文
SCIENTIFIC REPORTS, 2024, 卷号: 14, 期号: 1, 页码: 11
作者:  Li, Chun-Peng;  Dai, Weiwei;  Xiao, Yun-Peng;  Qi, Mengying;  Zhang, Ling-Xiao;  Gao, Lin;  Zhang, Fang-Lue;  Lai, Yu-Kun;  Liu, Chang;  Lu, Jing;  Chen, Fen;  Chen, Dan;  Shi, Shuai;  Li, Shaowei;  Zeng, Qingyan;  Chen, Yiqiang
收藏  |  浏览/下载：19/0  |  提交时间：2024/12/06
Fungal keratitis  Image classification  Neural network  Transformer  
TransPhos: A Deep-Learning Model for General Phosphorylation Site Prediction Based on Transformer-Encoder Architecture 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 卷号: 23, 期号: 8, 页码: 17
作者:  Wang, Xun;  Zhang, Zhiyuan;  Zhang, Chaogang;  Meng, Xiangyu;  Shi, Xin;  Qu, Peng
收藏  |  浏览/下载：48/0  |  提交时间：2022/12/07
phosphorylation site prediction  transformer  post-translational modifications  
piRBase: integrating piRNA annotation in all aspects 期刊论文
NUCLEIC ACIDS RESEARCH, 2022, 卷号: 50, 期号: D1, 页码: D265-D272
作者:  Wang, Jiajia;  Shi, Yirong;  Zhou, Honghong;  Zhang, Peng;  Song, Tingrui;  Ying, Zhiye;  Yu, Haopeng;  Li, Yanyan;  Zhao, Yi;  Zeng, Xiaoxi;  He, Shunmin;  Chen, Runsheng
收藏  |  浏览/下载：46/0  |  提交时间：2022/12/07
Logic Design and Simulation of a 128-b AES Encryption Accelerator Based on Rapid Single-Flux-Quantum Circuits 期刊论文
IEEE TRANSACTIONS ON APPLIED SUPERCONDUCTIVITY, 2021, 卷号: 31, 期号: 6, 页码: 11
作者:  Zhou, Yan;  Tang, Guang-Ming;  Yang, Jia-Hong;  Yu, Pei-Shi;  Peng, Changgen
收藏  |  浏览/下载：58/0  |  提交时间：2021/12/01
Accelerator  Advanced Encryption Standard (AES)  rapid single flux quantum (RSFQ)  superconducting integrated circuits  
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021 期刊论文
NUCLEIC ACIDS RESEARCH, 2021, 卷号: 49, 期号: D1, 页码: D18-D28
作者:  Xue, Yongbiao;  Bao, Yiming;  Zhang, Zhang;  Zhao, Wenming;  Xiao, Jingfa;  He, Shunmin;  Zhang, Guoqing;  Li, Yixue;  Zhao, Guoping;  Chen, Runsheng;  Song, Shuhui;  Ma, Lina;  Zou, Dong;  Tian, Dongmei;  Li, Cuiping;  Zhu, Junwei;  Gong, Zheng;  Chen, Meili;  Wang, Anke;  Ma, Yingke;  Li, Mengwei;  Teng, Xufei;  Cui, Ying;  Duan, Guangya;  Zhang, Mochen;  Jin, Tong;  Shi, Chengmin;  Du, Zhenglin;  Zhang, Yadong;  Liu, Chuandong;  Li, Rujiao;  Zeng, Jingyao;  Hao, Lili;  Jiang, Shuai;  Chen, Hua;  Han, Dali;  Yongbiao, Xue;  Zhang, Tao;  Kang, Wang;  Qu, Jing;  Zhang, Weiqi;  Liu, Guang-Hui;  Liu, Lin;  Zhang, Yang;  Niu, Guangyi;  Zhu, Tongtong;  Feng, Changrui;  Liu, Xiaonan;  Zhang, Yuansheng;  Li, Zhao;  Chen, Ruru;  Li, Qianpeng;  Hua, Zhongyi;  Jiang, Chao;  Chen, Ziyuan;  He, Fangshu;  Zhao, Yuyang;  Jin, Yan;  Huang, Luqi;  Yuan, Yuan;  Zhou, Chenfen;  Xu, Qingwei;  He, Sheng;  Ye, Wei;  Cao, Ruifang;  Wang, Pengyu;  Ling, Yunchao;  Yan, Xing;  Wang, Qingzhong;  Du, Qiang;  Zong, Wenting;  Kang, Hongen;  Xiong, Zhuang;  Huan, Wendi;  Zhang, Sirui;  Xia, Qiguang;  Fan, Xiaojuan;  Wang, Zefeng;  Chen, Xu;  Chen, Tingting;  Zhang, Sisi;  Tang, Bixia;  Dong, Lili;  Zhang, Zhewen;  Wang, Zhonghuang;  Kang, Hailong;  Wang, Yanqing;  Wu, Song;  Wang, Honggen;  Chen, Ming;  Liu, Chang;  Xiong, Yujia;  Shao, Xueying;  Li, Yanyan;  Zhou, Honghong;  Chen, Xiaomin;  Zheng, Yu;  Kang, Quan;  Hao, Di;  Zhang, Lili;  Luo, Huaxia;  Hao, Yajing;  Zhang, Peng;  Nie, Zhi;  Yu, Shuhuan;  Yang, Fei;  Sang, Jian;  Li, Zhaohua;  Zhang, Xiangquan;  Zhou, Qing;  Zhai, Shuang;  Zhang, Yaping;  Wang, Guodong;  Zhu, Qianghui;  Li, Xin;  Li, Menghua;  Yan, Jun;  Li, Chen;  Wang, Zhennan;  Wang, Xiangfeng;  Liu, Yuanming;  Luo, Hong;  Wu, Xiaoyuan;  Jing, HaiChun;  Song, Tinrui;  Zhao, Yi;  Mehmood, Furrukh;  Ali, Shahid;  Ali, Amjad;  Saleem, Shoaib;  Hussain, Irfan;  Abbasi, Amir A.;  Zuo, Zhixiang;  Ren, Jian;  Zhang, Xinxin;  Xiao, Yun;  Li, Xia;  Tu, Yiran;  Xue, Yu;  Wu, Wanying;  Ji, Peifeng;  Zhao, Fangqing;  Meng, Xianwen;  Peng, Di;  Luo, Hao;  Gao, Feng;  Ning, Wanshan;  Lin, Shaofeng;  Liu, Teng;  Guo, An-Yuan;  Yuan, Hao;  Zhang, Yong E.;  Tan, Xiaodan;  Zhang, Weizhi;  Xie, Yubin;  Wang, Chenwei;  Liu, Chun-Jie;  Yang, De-Chang;  Tian, Feng;  Gao, Ge;  Tang, Dachao;  Yao, Lan;  Cui, Qinghua;  An, Ni A.;  Li, Chuan-Yun;  Luo, XiaoTong
收藏  |  浏览/下载：124/0  |  提交时间：2021/12/01
A novel virtual screening procedure identifies Pralatrexate as inhibitor of SARS-CoV-2 RdRp and it reduces viral replication in vitro 期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2020, 卷号: 16, 期号: 12, 页码: 20
作者:  Zhang, Haiping;  Yang, Yang;  Li, Junxin;  Wang, Min;  Saravanan, Konda Mani;  Wei, Jinli;  Ng, Justin Tze-Yang;  Hossain, Md Tofazzal;  Liu, Maoxuan;  Zhang, Huiling;  Ren, Xiaohu;  Pan, Yi;  Peng, Yin;  Shi, Yi;  Wan, Xiaochun;  Liu, Yingxia;  Wei, Yanjie
收藏  |  浏览/下载：61/0  |  提交时间：2021/12/01
Database Resources of the National Genomics Data Center in 2020 期刊论文
NUCLEIC ACIDS RESEARCH, 2020, 卷号: 48, 期号: D1, 页码: D24-D33
作者:  Zhang, Zhang;  Zhao, Wenming;  Xiao, Jingfa;  Bao, Yiming;  He, Shunmin;  Zhang, Guoqing;  Li, Yixue;  Zhao, Guoping;  Chen, Runsheng;  Gao, Yang;  Zhang, Chao;  Yuan, Liyun;  Xu, Shuhua;  Ning, Zhilin;  Lu, Yan;  Zeng, Jingyao;  Yuan, Na;  Zhu, Junwei;  Pan, Mengyu;  Zhang, Hao;  Wang, Qi;  Shi, Shuo;  Jiang, Meiye;  Lu, Mingming;  Qian, Qiheng;  Gao, Qianwen;  Shang, Yunfei;  Wang, Jinyue;  Du, Zhenglin;  Tian, Dongmei;  Wang, Pei;  Tang, Bixia;  Li, Cuiping;  Teng, Xufei;  Liu, Xiaonan;  Zou, Dong;  Song, Shuhui;  Xiong, Zhuang;  Li, Mengwei;  Yang, Fei;  Ma, Yingke;  Sang, Jian;  Li, Zhaohua;  Li, Rujiao;  Wang, Zhonghuang;  Zhu, Qianghui;  Li, Xin;  Zhang, Sisi;  Kang, Hailong;  Dong, Lili;  Ying, Cui;  Duan, Guangya;  Li, Menghua;  Zhi, Xiaoyang;  Ling, Yunchao;  Cao, Ruifang;  Jiang, Zhao;  Zhou, Haokui;  Lv, Daqing;  Liu, Wan;  Klenk, Hans-Peter;  Zhang, Yadong;  Zhang, Zhewen;  Chen, Tingting;  Chen, Xu;  Wang, Yanqing;  Wu, Song;  Gong, Zheng;  Chen, Meili;  Fang, Shuangsang;  Zhang, Lili;  Guo, Jincheng;  Niu, Yiwei;  Wu, Yang;  Li, Hui;  Zhao, Lianhe;  Li, Xiyuan;  Teng, Xueyi;  Sun, Xianhui;  Sun, Liang;  Zhao, Yi;  Wang, Jiajia;  Zhang, Peng;  Li, Yanyan;  Zheng, Yu;  Chen, Xiaomin;  Xue, Hua;  Teng, Yiheng;  Kang, Quan;  Hao, Yajing;  Cao, Jiabao;  Liu, Lin;  Li, Zhao;  Li, Qianpeng;  Du, Qiang;  Abbasi, Amir A.;  Shireen, Huma;  Pervaiz, Nashaiman;  Batool, Fatima;  Raza, Rabail Z.;  Ma, Lina;  Niu, Guangyi;  Zhang, Yuansheng;  Zhu, Tongtong;  Hao, Lili;  Wang, Guoliang;  Yan, Jun;  Li, Chen;  Wang, Zhennan;  Wang, Xiangfeng;  Li, Zhonghai;  Zhang, Yang;  Wang, Houling;  Zhang, Yi;  Xia, Xinli;  Guo, Hongwei;  Zhu, Junwen;  Zhou, Qing;  Kang, Hongen;  Lan, Li;  Zhang, Xin;  Xue, Yongbiao;  Sun, Yubin;  Zhai, Shuang;  Yu, Lei;  Sun, Mingyuan;  Chen, Huanxin;  Hu, Hui;  Guo, An-Yuan;  Lin, Shaofeng;  Xue, Yu;  Wang, Chenwei;  Ning, Wanshan;  Zhang, Xinxin;  Xiao, Yun;  Li, Xia;  Tu, Yiran;  Wu, Wanying;  Ji, Peifeng;  Zhao, Fangqing;  Luo, Hao;  Gao, Feng;  Guo, Yaping;  Yuan, Hao;  Zhang, Yong E.;  Zhang, Qiong;  Zhou, Jiaqi;  Huang, Zhou;  Cui, Qinghua;  Miao, Ya-Ru;  Ruan, Chen;  Yuan, Chunhui;  Chen, Ming;  Jin, Jin-Pu;  Tian, Feng;  Gao, Ge;  Shi, Ying;  Yao, Lan;  Li, Xiangshang;  Li, Chuan-Yun;  Tang, Qing;  Peng, Di
收藏  |  浏览/下载：133/0  |  提交时间：2020/12/10