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Predicting transcriptional responses to novel chemical perturbations using deep generative model for drug discovery 期刊论文
NATURE COMMUNICATIONS, 2024, 卷号: 15, 期号: 1, 页码: 19
作者:  Qi, Xiaoning;  Zhao, Lianhe;  Tian, Chenyu;  Li, Yueyue;  Chen, Zhen-Lin;  Huo, Peipei;  Chen, Runsheng;  Liu, Xiaodong;  Wan, Baoping;  Yang, Shengyong;  Zhao, Yi
收藏  |  浏览/下载：2/0  |  提交时间：2024/12/06
NPInter v5.0: ncRNA interaction database in a new era 期刊论文
NUCLEIC ACIDS RESEARCH, 2022, 页码: 8
作者:  Zheng, Yu;  Luo, Huaxia;  Teng, Xueyi;  Hao, Xinpei;  Yan, Xiaoyu;  Tang, Yiheng;  Zhang, Wanyu;  Wang, Yuanxin;  Zhang, Peng;  Li, Yanyan;  Zhao, Yi;  Chen, Runsheng;  He, Shunmin
收藏  |  浏览/下载：27/0  |  提交时间：2023/07/12
piRBase: integrating piRNA annotation in all aspects 期刊论文
NUCLEIC ACIDS RESEARCH, 2022, 卷号: 50, 期号: D1, 页码: D265-D272
作者:  Wang, Jiajia;  Shi, Yirong;  Zhou, Honghong;  Zhang, Peng;  Song, Tingrui;  Ying, Zhiye;  Yu, Haopeng;  Li, Yanyan;  Zhao, Yi;  Zeng, Xiaoxi;  He, Shunmin;  Chen, Runsheng
收藏  |  浏览/下载：31/0  |  提交时间：2022/12/07
NONCODEV6: an updated database dedicated to long non-coding RNA annotation in both animals and plants 期刊论文
NUCLEIC ACIDS RESEARCH, 2021, 卷号: 49, 期号: D1, 页码: D165-D171
作者:  Zhao, Lianhe;  Wang, Jiajia;  Li, Yanyan;  Song, Tingrui;  Wu, Yang;  Fang, Shuangsang;  Bu, Dechao;  Li, Hui;  Sun, Liang;  Pei, Dong;  Zheng, Yu;  Huang, Jianqin;  Xu, Mingqing;  Chen, Runsheng;  Zhao, Yi;  He, Shunmin
收藏  |  浏览/下载：47/0  |  提交时间：2021/12/01
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2021 期刊论文
NUCLEIC ACIDS RESEARCH, 2021, 卷号: 49, 期号: D1, 页码: D18-D28
作者:  Xue, Yongbiao;  Bao, Yiming;  Zhang, Zhang;  Zhao, Wenming;  Xiao, Jingfa;  He, Shunmin;  Zhang, Guoqing;  Li, Yixue;  Zhao, Guoping;  Chen, Runsheng;  Song, Shuhui;  Ma, Lina;  Zou, Dong;  Tian, Dongmei;  Li, Cuiping;  Zhu, Junwei;  Gong, Zheng;  Chen, Meili;  Wang, Anke;  Ma, Yingke;  Li, Mengwei;  Teng, Xufei;  Cui, Ying;  Duan, Guangya;  Zhang, Mochen;  Jin, Tong;  Shi, Chengmin;  Du, Zhenglin;  Zhang, Yadong;  Liu, Chuandong;  Li, Rujiao;  Zeng, Jingyao;  Hao, Lili;  Jiang, Shuai;  Chen, Hua;  Han, Dali;  Yongbiao, Xue;  Zhang, Tao;  Kang, Wang;  Qu, Jing;  Zhang, Weiqi;  Liu, Guang-Hui;  Liu, Lin;  Zhang, Yang;  Niu, Guangyi;  Zhu, Tongtong;  Feng, Changrui;  Liu, Xiaonan;  Zhang, Yuansheng;  Li, Zhao;  Chen, Ruru;  Li, Qianpeng;  Hua, Zhongyi;  Jiang, Chao;  Chen, Ziyuan;  He, Fangshu;  Zhao, Yuyang;  Jin, Yan;  Huang, Luqi;  Yuan, Yuan;  Zhou, Chenfen;  Xu, Qingwei;  He, Sheng;  Ye, Wei;  Cao, Ruifang;  Wang, Pengyu;  Ling, Yunchao;  Yan, Xing;  Wang, Qingzhong;  Du, Qiang;  Zong, Wenting;  Kang, Hongen;  Xiong, Zhuang;  Huan, Wendi;  Zhang, Sirui;  Xia, Qiguang;  Fan, Xiaojuan;  Wang, Zefeng;  Chen, Xu;  Chen, Tingting;  Zhang, Sisi;  Tang, Bixia;  Dong, Lili;  Zhang, Zhewen;  Wang, Zhonghuang;  Kang, Hailong;  Wang, Yanqing;  Wu, Song;  Wang, Honggen;  Chen, Ming;  Liu, Chang;  Xiong, Yujia;  Shao, Xueying;  Li, Yanyan;  Zhou, Honghong;  Chen, Xiaomin;  Zheng, Yu;  Kang, Quan;  Hao, Di;  Zhang, Lili;  Luo, Huaxia;  Hao, Yajing;  Zhang, Peng;  Nie, Zhi;  Yu, Shuhuan;  Yang, Fei;  Sang, Jian;  Li, Zhaohua;  Zhang, Xiangquan;  Zhou, Qing;  Zhai, Shuang;  Zhang, Yaping;  Wang, Guodong;  Zhu, Qianghui;  Li, Xin;  Li, Menghua;  Yan, Jun;  Li, Chen;  Wang, Zhennan;  Wang, Xiangfeng;  Liu, Yuanming;  Luo, Hong;  Wu, Xiaoyuan;  Jing, HaiChun;  Song, Tinrui;  Zhao, Yi;  Mehmood, Furrukh;  Ali, Shahid;  Ali, Amjad;  Saleem, Shoaib;  Hussain, Irfan;  Abbasi, Amir A.;  Zuo, Zhixiang;  Ren, Jian;  Zhang, Xinxin;  Xiao, Yun;  Li, Xia;  Tu, Yiran;  Xue, Yu;  Wu, Wanying;  Ji, Peifeng;  Zhao, Fangqing;  Meng, Xianwen;  Peng, Di;  Luo, Hao;  Gao, Feng;  Ning, Wanshan;  Lin, Shaofeng;  Liu, Teng;  Guo, An-Yuan;  Yuan, Hao;  Zhang, Yong E.;  Tan, Xiaodan;  Zhang, Weizhi;  Xie, Yubin;  Wang, Chenwei;  Liu, Chun-Jie;  Yang, De-Chang;  Tian, Feng;  Gao, Ge;  Tang, Dachao;  Yao, Lan;  Cui, Qinghua;  An, Ni A.;  Li, Chuan-Yun;  Luo, XiaoTong
收藏  |  浏览/下载：97/0  |  提交时间：2021/12/01
NPInter v4.0: an integrated database of ncRNA interactions 期刊论文
NUCLEIC ACIDS RESEARCH, 2020, 卷号: 48, 期号: D1, 页码: D160-D165
作者:  Teng, Xueyi;  Chen, Xiaomin;  Xue, Hua;  Tang, Yiheng;  Zhang, Peng;  Kang, Quan;  Hao, Yajing;  Chen, Runsheng;  Zhao, Yi;  He, Shunmin
收藏  |  浏览/下载：62/0  |  提交时间：2020/12/10
Database Resources of the National Genomics Data Center in 2020 期刊论文
NUCLEIC ACIDS RESEARCH, 2020, 卷号: 48, 期号: D1, 页码: D24-D33
作者:  Zhang, Zhang;  Zhao, Wenming;  Xiao, Jingfa;  Bao, Yiming;  He, Shunmin;  Zhang, Guoqing;  Li, Yixue;  Zhao, Guoping;  Chen, Runsheng;  Gao, Yang;  Zhang, Chao;  Yuan, Liyun;  Xu, Shuhua;  Ning, Zhilin;  Lu, Yan;  Zeng, Jingyao;  Yuan, Na;  Zhu, Junwei;  Pan, Mengyu;  Zhang, Hao;  Wang, Qi;  Shi, Shuo;  Jiang, Meiye;  Lu, Mingming;  Qian, Qiheng;  Gao, Qianwen;  Shang, Yunfei;  Wang, Jinyue;  Du, Zhenglin;  Tian, Dongmei;  Wang, Pei;  Tang, Bixia;  Li, Cuiping;  Teng, Xufei;  Liu, Xiaonan;  Zou, Dong;  Song, Shuhui;  Xiong, Zhuang;  Li, Mengwei;  Yang, Fei;  Ma, Yingke;  Sang, Jian;  Li, Zhaohua;  Li, Rujiao;  Wang, Zhonghuang;  Zhu, Qianghui;  Li, Xin;  Zhang, Sisi;  Kang, Hailong;  Dong, Lili;  Ying, Cui;  Duan, Guangya;  Li, Menghua;  Zhi, Xiaoyang;  Ling, Yunchao;  Cao, Ruifang;  Jiang, Zhao;  Zhou, Haokui;  Lv, Daqing;  Liu, Wan;  Klenk, Hans-Peter;  Zhang, Yadong;  Zhang, Zhewen;  Chen, Tingting;  Chen, Xu;  Wang, Yanqing;  Wu, Song;  Gong, Zheng;  Chen, Meili;  Fang, Shuangsang;  Zhang, Lili;  Guo, Jincheng;  Niu, Yiwei;  Wu, Yang;  Li, Hui;  Zhao, Lianhe;  Li, Xiyuan;  Teng, Xueyi;  Sun, Xianhui;  Sun, Liang;  Zhao, Yi;  Wang, Jiajia;  Zhang, Peng;  Li, Yanyan;  Zheng, Yu;  Chen, Xiaomin;  Xue, Hua;  Teng, Yiheng;  Kang, Quan;  Hao, Yajing;  Cao, Jiabao;  Liu, Lin;  Li, Zhao;  Li, Qianpeng;  Du, Qiang;  Abbasi, Amir A.;  Shireen, Huma;  Pervaiz, Nashaiman;  Batool, Fatima;  Raza, Rabail Z.;  Ma, Lina;  Niu, Guangyi;  Zhang, Yuansheng;  Zhu, Tongtong;  Hao, Lili;  Wang, Guoliang;  Yan, Jun;  Li, Chen;  Wang, Zhennan;  Wang, Xiangfeng;  Li, Zhonghai;  Zhang, Yang;  Wang, Houling;  Zhang, Yi;  Xia, Xinli;  Guo, Hongwei;  Zhu, Junwen;  Zhou, Qing;  Kang, Hongen;  Lan, Li;  Zhang, Xin;  Xue, Yongbiao;  Sun, Yubin;  Zhai, Shuang;  Yu, Lei;  Sun, Mingyuan;  Chen, Huanxin;  Hu, Hui;  Guo, An-Yuan;  Lin, Shaofeng;  Xue, Yu;  Wang, Chenwei;  Ning, Wanshan;  Zhang, Xinxin;  Xiao, Yun;  Li, Xia;  Tu, Yiran;  Wu, Wanying;  Ji, Peifeng;  Zhao, Fangqing;  Luo, Hao;  Gao, Feng;  Guo, Yaping;  Yuan, Hao;  Zhang, Yong E.;  Zhang, Qiong;  Zhou, Jiaqi;  Huang, Zhou;  Cui, Qinghua;  Miao, Ya-Ru;  Ruan, Chen;  Yuan, Chunhui;  Chen, Ming;  Jin, Jin-Pu;  Tian, Feng;  Gao, Ge;  Shi, Ying;  Yao, Lan;  Li, Xiangshang;  Li, Chuan-Yun;  Tang, Qing;  Peng, Di
收藏  |  浏览/下载：111/0  |  提交时间：2020/12/10
RNAcentral: a hub of information for non-coding RNA sequences 期刊论文
NUCLEIC ACIDS RESEARCH, 2019, 卷号: 47, 期号: D1, 页码: D221-D229
作者:  Sweeney, Blake A.;  Petrov, Anton I.;  Burkov, Boris;  Finn, Robert D.;  Bateman, Alex;  Szymanski, Maciej;  Karlowski, Wojciech M.;  Gorodkin, Jan;  Seemann, Stefan E.;  Cannone, Jamie J.;  Gutell, Robin R.;  Fey, Petra;  Basu, Siddhartha;  Kay, Simon;  Cochrane, Guy;  Billis, Kostantinos;  Emmert, David;  Marygold, Steven J.;  Huntley, Rachael P.;  Lovering, Ruth C.;  Frankish, Adam;  Chan, Patricia P.;  Lowe, Todd M.;  Bruford, Elspeth;  Seal, Ruth;  Vandesompele, Jo;  Volders, Pieter-Jan;  Paraskevopoulou, Maria;  Ma, Lina;  Zhang, Zhang;  Griffiths-Jones, Sam;  Bujnicki, Janusz M.;  Boccaletto, Pietro;  Blake, Judith A.;  Bult, Carol J.;  Chen, Runsheng;  Zhao, Yi;  Wood, Valerie;  Rutherford, Kim;  Rivas, Elena;  Cole, James;  Laulederkind, Stanley J. F.;  Shimoyama, Mary;  Gillespie, Marc E.;  Orlic-Milacic, Marija;  Kalvari, Ioanna;  Nawrocki, Eric;  Engel, Stacia R.;  Cherry, J. Michael;  Berardini, Tanya Z.;  Hatzigeorgiou, Artemis;  Karagkouni, Dimitra;  Howe, Kevin;  Davis, Paul;  Dinger, Marcel;  He, Shunmin;  Yoshihama, Maki;  Kenmochi, Naoya;  Stadler, Peter F.;  Williams, Kelly P.
收藏  |  浏览/下载：326/0  |  提交时间：2019/08/16
RNAcentral: a hub of information for non-coding RNA sequences (vol 47, pg D221, 2019) 期刊论文
NUCLEIC ACIDS RESEARCH, 2019, 卷号: 47, 期号: D1, 页码: D1250-D1251
作者:  Sweeney, Blake A.;  Petrov, Anton I.;  Burkov, Boris;  Finn, Robert D.;  Bateman, Alex;  Szymanski, Maciej;  Karlowski, Wojciech M.;  Gorodkin, Jan;  Seemann, Stefan E.;  Cannone, Jamie J.;  Gutell, Robin R.;  Fey, Petra;  Basu, Siddhartha;  Kay, Simon;  Cochrane, Guy;  Billis, Kostantinos;  Emmert, David;  Marygold, Steven J.;  Huntley, Rachael P.;  Lovering, Ruth C.;  Frankish, Adam;  Chan, Patricia P.;  Lowe, Todd M.;  Bruford, Elspeth;  Seal, Ruth;  Vandesompele, Jo;  Volders, Pieter-Jan;  Paraskevopoulou, Maria;  Ma, Lina;  Zhang, Zhang;  Griffiths-Jones, Sam;  Bujnicki, Janusz M.;  Boccaletto, Pietro;  Blake, Judith A.;  Bult, Carol J.;  Chen, Runsheng;  Zhao, Yi;  Wood, Valerie;  Rutherford, Kim;  Rivas, Elena;  Cole, James;  Laulederkind, Stanley J. F.;  Shimoyama, Mary;  Gillespie, Marc E.;  Orlic-Milacic, Marija;  Kalvari, Ioanna;  Nawrocki, Eric;  Engel, Stacia R.;  Cherry, J. Michael;  Berardini, Tanya Z.;  Hatzigeorgiou, Artemis;  Karagkouni, Dimitra;  Howe, Kevin;  Davis, Paul;  Dinger, Marcel;  He, Shunmin;  Yoshihama, Maki;  Kenmochi, Naoya;  Stadler, Peter F.;  Williams, Kelly P.
收藏  |  浏览/下载：96/0  |  提交时间：2019/08/16
Toward Automated Identification of Glycan Branching Patterns Using Multistage Mass Spectrometry with Intelligent Precursor Selection 期刊论文
ANALYTICAL CHEMISTRY, 2018, 卷号: 90, 期号: 24, 页码: 14412-14422
作者:  Sun, Shiwei;  Huang, Chuncui;  Wang, Yaojun;  Liu, Yaming;  Zhang, Jingwei;  Zhou, Jinyu;  Gao, Feng;  Yang, Fei;  Chen, Runsheng;  Mulloy, Barbara;  Chai, Wengang;  Li, Yan;  Bu, Dongbo
收藏  |  浏览/下载：261/0  |  提交时间：2019/04/03