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Protein Structure Prediction: Challenges, Advances, and the Shift of Research Paradigms 期刊论文
GENOMICS PROTEOMICS & BIOINFORMATICS, 2023, 卷号: 21, 期号: 5, 页码: 913-925
作者:  Huang, Bin;  Kong, Lupeng;  Wang, Chao;  Ju, Fusong;  Zhang, Qi;  Zhu, Jianwei;  Gong, Tiansu;  Zhang, Haicang;  Yu, Chungong;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：2/0  |  提交时间：2024/05/20
Protein folding  Protein structure prediction  Deep learning  Transformer  Language model  
First mapping of China surface movement using supercomputing interferometric SAR technique 期刊论文
SCIENCE BULLETIN, 2021, 卷号: 66, 期号: 16, 页码: 1608-1610
作者:  Wang, Chao;  Tang, Yixian;  Zhang, Hong;  You, Haihang;  Zhang, Weikang;  Duan, Wei;  Wang, Jing;  Dong, Longkai;  Zhang, Bo
收藏  |  浏览/下载：45/0  |  提交时间：2021/12/01
Field-Free 3T2SOT MRAM for Non-Volatile Cache Memories 期刊论文
IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS I-REGULAR PAPERS, 2020, 卷号: 67, 期号: 12, 页码: 4660-4669
作者:  Wu, Bi;  Wang, Chao;  Wang, Zhaohao;  Wang, Ying;  Zhang, Deming;  Liu, Dijun;  Zhang, Youguang;  Hu, Xiaobo Sharon
收藏  |  浏览/下载：37/0  |  提交时间：2021/12/01
Random access memory  Magnetic tunneling  Switches  Reliability  Tunneling magnetoresistance  Metals  Transistors  SOT-MRAM  low power  high speed  high reliability  
Bulkyflip: A NAND-SPIN-Based Last-Level Cache With Bandwidth-Oriented Write Management Policy 期刊论文
IEEE TRANSACTIONS ON CIRCUITS AND SYSTEMS I-REGULAR PAPERS, 2020, 卷号: 67, 期号: 1, 页码: 108-120
作者:  Wu, Bi;  Dai, Pengcheng;  Wang, Zhaohao;  Wang, Chao;  Wang, Ying;  Yang, Jianlei;  Cheng, Yuanqing;  Liu, Dijun;  Zhang, Youguang;  Zhao, Weisheng;  Hu, Xiaobo Sharon
收藏  |  浏览/下载：49/0  |  提交时间：2020/12/10
NAND-SPIN  spin orbit torque (SOT) MRAM  last level cache  write throughput  high performance  
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 10
作者:  Wang, Chao;  Wei, Yi;  Zhang, Haicang;  Kong, Lupeng;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：80/0  |  提交时间：2019/08/16
Protein structure prediction  Energy function  Attraction-basin  Reverse Monte Carlo sampling  Monte Carlo search  Linear program  
Improving protein fold recognition by extracting fold-specific features from predicted residue-residue contacts 期刊论文
BIOINFORMATICS, 2017, 卷号: 33, 期号: 23, 页码: 3749-3757
作者:  Zhu, Jianwei;  Zhang, Haicang;  Li, Shuai Cheng;  Wang, Chao;  Kong, Lupeng;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：56/0  |  提交时间：2019/12/10
Service-Oriented Architecture on FPGA-Based MPSoC 期刊论文
IEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS, 2017, 卷号: 28, 期号: 10, 页码: 2993-3006
作者:  Wang, Chao;  Li, Xi;  Chen, Yunji;  Zhang, Youhui;  Diessel, Oliver;  Zhou, Xuehai
收藏  |  浏览/下载：65/0  |  提交时间：2019/12/12
Service-oriented architecture  multiprocessor  system on chip  
Improving prediction of burial state of residues by exploiting correlation among residues 期刊论文
BMC BIOINFORMATICS, 2017, 卷号: 18, 页码: 11
作者:  Gong, Hai'e;  Zhang, Haicang;  Zhu, Jianwei;  Wang, Chao;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：56/0  |  提交时间：2019/12/12
Protein structure  Burial states of residue  Conditional random field  Residue correlation  
Insights into the transmission of respiratory infectious diseases through empirical human contact networks 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6, 页码: 11
作者:  Huang, Chunlin;  Liu, Xingwu;  Sun, Shiwei;  Li, Shuai Cheng;  Deng, Minghua;  He, Guangxue;  Zhang, Haicang;  Wang, Chao;  Zhou, Yang;  Zhao, Yanlin;  Bu, Dongbo
收藏  |  浏览/下载：66/0  |  提交时间：2019/12/13
Improving residue-residue contact prediction via low-rank and sparse decomposition of residue correlation matrix 期刊论文
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2016, 卷号: 472, 期号: 1, 页码: 217-222
作者:  Zhang, Haicang;  Gao, Yujuan;  Deng, Minghua;  Wang, Chao;  Zhu, Jianwei;  Li, Shuai Cheng;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：61/0  |  提交时间：2019/12/13
Protein contacts prediction  Correlation analysis  Background correlation removal  Low-rank and sparse matrix decomposition