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A new paradigm for applying deep learning to protein-ligand interaction prediction 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2024, 卷号: 25, 期号: 3, 页码: 12
作者:  Wang, Zechen;  Wang, Sheng;  Li, Yangyang;  Guo, Jingjing;  Wei, Yanjie;  Mu, Yuguang;  Zheng, Liangzhen;  Li, Weifeng
收藏  |  浏览/下载：2/0  |  提交时间：2024/12/06
protein-ligand interaction  scoring function  deep learning  graph neural network  
Recent Progress in Chemical Cross-linking Coupled With Mass Spectrometry 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2022, 卷号: 49, 期号: 4, 页码: 737-758
作者:  Chen Zhen-Lin;  Cao Yong;  He Si-Min
收藏  |  浏览/下载：29/0  |  提交时间：2022/12/07
cross-linking mass spectrometry  protein structure  protein interaction  proteomics  mass spectrometry  
A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification 期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2011, 卷号: 35, 期号: 5, 页码: 298-307
作者:  Yu, Liang;  Gao, Lin;  Li, Kui;  Zhao, Yi;  Chiu, David K. Y.
收藏  |  浏览/下载：74/0  |  提交时间：2019/12/16
Protein-protein interaction (PPI) networks  Complexes  Degree distribution  Hierarchical agglomerative algorithm  
Integrated analysis of multiple data sources reveals modular structure of biological networks 期刊论文
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2006, 卷号: 345, 期号: 1, 页码: 302-309
作者:  Lu, HC;  Shi, BC;  Wu, GW;  Zhang, Y;  Zhu, XP;  Zhang, ZH;  Liu, CN;  Zhao, Y;  Wu, T;  Wang, J;  Chen, RS
收藏  |  浏览/下载：44/0  |  提交时间：2019/12/16
integrated analysis of multiple data sources  hierarchical clustering algorithm  protein-protein interaction network  modular structure of biological networks  
Predicting protein function based on modularized protein interaction network 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2006, 卷号: 33, 期号: 5, 页码: 446-451
作者:  Lu, HC;  Shi, QY;  Shi, BC;  Zhang, ZH;  Zhao, Y;  Tang, SQ;  Xiong, L;  Wang, Q;  Chen, RS
收藏  |  浏览/下载：48/0  |  提交时间：2019/12/16
protein-protein interaction network  predicting function of proteins  clustering  
Faster and more accurate global protein function assignment from protein interaction networks using the MFGO algorithm 期刊论文
FEBS LETTERS, 2006, 卷号: 580, 期号: 7, 页码: 1891-1896
作者:  Sun, SW;  Zhao, Y;  Jiao, YS;  Yin, YF;  Cai, L;  Zhang, Y;  Lu, HC;  Chen, RS;  Bu, DB
收藏  |  浏览/下载：44/0  |  提交时间：2019/12/16
protein interaction network  function prediction  global optimization  
Analysis of correlations between protein complex and protein-protein interaction and mRNA expression 期刊论文
CHINESE SCIENCE BULLETIN, 2003, 卷号: 48, 期号: 20, 页码: 2226-2230
作者:  Cai, L;  Xue, H;  Lu, HC;  Zhao, Y;  Zhu, XP;  Bu, DB;  Ling, LJ;  Chen, RS
收藏  |  浏览/下载：73/0  |  提交时间：2019/12/16
protein-protein interaction  mRNA expression  protein complex  correlation  yeast