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GRACE: An End-to-End Graph Processing Accelerator on FPGA With Graph Reordering Engine 期刊论文
IEEE TRANSACTIONS ON COMPUTER-AIDED DESIGN OF INTEGRATED CIRCUITS AND SYSTEMS, 2025, 卷号: 44, 期号: 10, 页码: 3816-3829
作者:  Fan, Haishuang;  Meng, Rui;  Sun, Qichu;  Wu, Jingya;  Lu, Wenyan;  Li, Xiaowei;  Yan, Guihai
收藏  |  浏览/下载：4/0  |  提交时间：2025/12/03
Field programmable gate arrays  Redundancy  Indexes  Graphics processing units  Central Processing Unit  Integrated circuit modeling  Computational modeling  Engines  Design automation  Data models  Accelerator  FPGA  Graph processing  
Monte Carlo Neural PDE Solver for Learning PDEs via Probabilistic Representation 期刊论文
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2025, 卷号: 47, 期号: 6, 页码: 5059-5075
作者:  Zhang, Rui;  Meng, Qi;  Zhu, Rongchan;  Wang, Yue;  Shi, Wenlei;  Zhang, Shihua;  Ma, Zhi-Ming;  Liu, Tie-Yan
收藏  |  浏览/下载：4/0  |  提交时间：2025/12/03
Training  Monte Carlo methods  Spatiotemporal phenomena  Accuracy  Probabilistic logic  Neural networks  Numerical models  Mathematical models  Finite difference methods  Diffusion processes  Neural PDE solver  Monte Carlo method  Feynman-Kac formula  AI for PDE  
CAN: Cascade Augmentations Against Noise for Image Restoration 期刊论文
IEEE TRANSACTIONS ON IMAGE PROCESSING, 2025, 卷号: 34, 页码: 5131-5146
作者:  Yan, Yanyang;  Yao, Siyuan;  Ren, Wenqi;  Zhang, Rui;  Guo, Qi;  Cao, Xiaochun
收藏  |  浏览/下载：4/0  |  提交时间：2025/12/03
Image restoration  cascade augmentations  cascade augmentations  noise corruptions  noise corruptions  
Sparse and Hierarchical Transformer for Survival Analysis on Whole Slide Images 期刊论文
IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS, 2024, 卷号: 28, 期号: 1, 页码: 7-18
作者:  Yan, Rui;  Lv, Zhilong;  Yang, Zhidong;  Lin, Senlin;  Zheng, Chunhou;  Zhang, Fa
收藏  |  浏览/下载：41/0  |  提交时间：2024/05/20
Hierarchical representation  pathological image analysis  sparse transformer  survival analysis  
TransSurv: Transformer-Based Survival Analysis Model Integrating Histopathological Images and Genomic Data for Colorectal Cancer 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2023, 卷号: 20, 期号: 6, 页码: 3411-3420
作者:  Lv, Zhilong;  Lin, Yuexiao;  Yan, Rui;  Wang, Ying;  Zhang, Fa
收藏  |  浏览/下载：77/0  |  提交时间：2024/05/20
Cancer  Genomics  Bioinformatics  Transformers  Tumors  Feature extraction  Prognostics and health management  Survival analysis  multi-modal learning  transformer  histopathological slides  genomic data  
Histopathological bladder cancer gene mutation prediction with hierarchical deep multiple-instance learning 期刊论文
MEDICAL IMAGE ANALYSIS, 2023, 卷号: 87, 页码: 13
作者:  Yan, Rui;  Shen, Yijun;  Zhang, Xueyuan;  Xu, Peihang;  Wang, Jun;  Li, Jintao;  Ren, Fei;  Ye, Dingwei;  Zhou, S. Kevin
收藏  |  浏览/下载：61/0  |  提交时间：2023/12/04
Bladder cancer  Contrastive learning  Gene mutation prediction  Histopathological image analysis  Multiple instance learning  
基于多尺度注意力机制的真菌显微图像分类方法 期刊论文
协和医学杂志, 2023, 卷号: 14, 期号: 1, 页码: 139
作者:  张雪媛;  许鸿雁;  董跃明;  刘丹凤;  孙鹏蕊;  颜锐;  崔洪亮;  雷红;  任菲
收藏  |  浏览/下载：50/0  |  提交时间：2024/05/20
fungal  convolutional neural network  image classification  multi-scale attention mechanism  真菌  卷积神经网络  图像分类  多尺度注意力机制  
Divide-and-Attention Network for HE-Stained Pathological Image Classification 期刊论文
BIOLOGY-BASEL, 2022, 卷号: 11, 期号: 7, 页码: 17
作者:  Yan, Rui;  Yang, Zhidong;  Li, Jintao;  Zheng, Chunhou;  Zhang, Fa
收藏  |  浏览/下载：67/0  |  提交时间：2022/12/07
pathological image classification  attention mechanism  convolutional neural network  knowledge embedding  
Nuclei-Guided Network for Breast Cancer Grading in HE-Stained Pathological Images 期刊论文
SENSORS, 2022, 卷号: 22, 期号: 11, 页码: 15
作者:  Yan, Rui;  Ren, Fei;  Li, Jintao;  Rao, Xiaosong;  Lv, Zhilong;  Zheng, Chunhou;  Zhang, Fa
收藏  |  浏览/下载：69/0  |  提交时间：2022/12/07
breast cancer grading  histopathological image  nuclei segmentation  convolutional neural network  attention mechanism  
VP-Detector: A 3D multi-scale dense convolutional neural network for macromolecule localization and classification in cryo-electron tomograms 期刊论文
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 2022, 卷号: 221, 页码: 14
作者:  Hao, Yu;  Wan, Xiaohua;  Yan, Rui;  Liu, Zhiyong;  Li, Jintao;  Zhang, Shihua;  Cui, Xuefeng;  Zhang, Fa
收藏  |  浏览/下载：53/0  |  提交时间：2023/07/12
Cryo-ET  Sub-tomogram averaging  Particle localization  Particle classification  Convolutional neural networks