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Sparse and Hierarchical Transformer for Survival Analysis on Whole Slide Images 期刊论文
IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS, 2024, 卷号: 28, 期号: 1, 页码: 7-18
作者:  Yan, Rui;  Lv, Zhilong;  Yang, Zhidong;  Lin, Senlin;  Zheng, Chunhou;  Zhang, Fa
收藏  |  浏览/下载:2/0  |  提交时间:2024/05/20
Hierarchical representation  pathological image analysis  sparse transformer  survival analysis  
TransSurv: Transformer-Based Survival Analysis Model Integrating Histopathological Images and Genomic Data for Colorectal Cancer 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2023, 卷号: 20, 期号: 6, 页码: 3411-3420
作者:  Lv, Zhilong;  Lin, Yuexiao;  Yan, Rui;  Wang, Ying;  Zhang, Fa
收藏  |  浏览/下载:9/0  |  提交时间:2024/05/20
Cancer  Genomics  Bioinformatics  Transformers  Tumors  Feature extraction  Prognostics and health management  Survival analysis  multi-modal learning  transformer  histopathological slides  genomic data  
Genomic and transcriptomic profiling indicates the prognosis significance of mutational signature for TMB-high subtype in Chinese patients with gastric cancer 期刊论文
JOURNAL OF ADVANCED RESEARCH, 2023, 卷号: 51, 页码: 121-134
作者:  Cheng, Yanan;  Bu, Dechao;  Zhang, Qiaoling;  Sun, Rebecca;  Lyle, Stephen;  Zhao, Gang;  Dong, Li;  Li, Hui;  Zhao, Yi;  Yu, Jinpu;  Hao, Xishan
收藏  |  浏览/下载:8/0  |  提交时间:2023/12/04
Gastric cancer  Comprehensive genomic profiling  TMB  Mutational signature  Tumor metabolism  
Identification of Key Genes as Potential Drug Targets for Gastric Cancer 期刊论文
TSINGHUA SCIENCE AND TECHNOLOGY, 2023, 卷号: 28, 期号: 4, 页码: 649-664
作者:  Hossain, Md. Tofazzal;  Reza, Md. Selim;  Peng, Yin;  Feng, Shengzhong;  Wei, Yanjie
收藏  |  浏览/下载:16/0  |  提交时间:2023/07/12
gastric cancer  hub genes  candidate genes  molecular docking  candidate drugs  
Cross Analysis of Genomic-Pathologic Features on Multiple Primary Hepatocellular Carcinoma 期刊论文
FRONTIERS IN GENETICS, 2022, 卷号: 13, 页码: 9
作者:  Ren, Fei;  Wang, Depin;  Zhang, Xueyuan;  Zhao, Na;  Wang, Xiaowen;  Zhang, Yu;  Li, Li
收藏  |  浏览/下载:14/0  |  提交时间:2023/07/12
hepatocellular carcinoma  whole exome sequencing  whole slide images  molecular profiling and subtyping  hepatitis B virus  
Disclosing Potential Key Genes, Therapeutic Targets and Agents for Non-Small Cell Lung Cancer: Evidence from Integrative Bioinformatics Analysis 期刊论文
VACCINES, 2022, 卷号: 10, 期号: 5, 页码: 20
作者:  Mosharaf, Md Parvez;  Reza, Md Selim;  Gov, Esra;  Mahumud, Rashidul Alam;  Mollah, Md Nurul Haque
收藏  |  浏览/下载:21/0  |  提交时间:2022/12/07
non-small cell lung cancer  gene expression profiles  molecular signatures  therapeutic targets and agents  integrated bioinformatics approaches  
A Novel Attention-Mechanism Based Cox Survival Model by Exploiting Pan-Cancer Empirical Genomic Information 期刊论文
CELLS, 2022, 卷号: 11, 期号: 9, 页码: 18
作者:  Meng, Xiangyu;  Wang, Xun;  Zhang, Xudong;  Zhang, Chaogang;  Zhang, Zhiyuan;  Zhang, Kuijie;  Wang, Shudong
收藏  |  浏览/下载:21/0  |  提交时间:2022/12/07
deep learning  survival analysis  neural networks  Cox regression  cancer prognosis  
Identification of circRNA Biomarker for Gastric Cancer through Integrated Analysis 期刊论文
FRONTIERS IN MOLECULAR BIOSCIENCES, 2022, 卷号: 9, 页码: 13
作者:  Hossain, Md. Tofazzal;  Li, Song;  Reza, Md. Selim;  Feng, Shengzhong;  Zhang, Xiaojing;  Jin, Zhe;  Wei, Yanjie;  Peng, Yin
收藏  |  浏览/下载:21/0  |  提交时间:2022/12/07
gastric cancer  circular RNA  computational approach  circRNA biomarker  circRNA-miRNA-gene interaction  
Radiosensitivity-Specific Proteomic and Signaling Pathway Network of Non-Small Cell Lung Cancer (NSCLC) 期刊论文
INTERNATIONAL JOURNAL OF RADIATION ONCOLOGY BIOLOGY PHYSICS, 2022, 卷号: 112, 期号: 2, 页码: 529-541
作者:  Zhu, Xueru;  Wang, Yiting;  Jiang, Chang;  Li, Xiaoyang;  Sun, Linying;  Wang, Guangzhong;  Fu, Xiaolong
收藏  |  浏览/下载:20/0  |  提交时间:2022/12/07
High Throughput Transcriptome Data Analysis and Computational Verification Reveal Immunotherapy Biomarkers of Compound Kushen Injection for Treating Triple-Negative Breast Cancer 期刊论文
FRONTIERS IN ONCOLOGY, 2021, 卷号: 11, 页码: 23
作者:  Liu, Xinkui;  Wu, Yang;  Zhang, Yingying;  Bu, Dechao;  Wu, Chao;  Lu, Shan;  Huang, Zhihong;  Song, Yurong;  Zhao, Yi;  Guo, Fengying;  Ye, Peizhi;  Fu, Changgeng;  Shen, Liangliang;  Zhang, Jingyuan;  Wang, Haojia;  Duan, Xianchun;  Wu, Jiarui
收藏  |  浏览/下载:29/0  |  提交时间:2022/06/21
compound kushen injection  triple-negative breast cancer  RNA sequencing  tumor microenvironment  prognostic signature