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Validation Methods of Peptide Identification Results in Proteomics* 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125
作者:  Zhou Wen-Jing;  Zeng Wen-Feng;  Chi Hao;  He Si-Min
收藏  |  浏览/下载：8/0  |  提交时间：2023/12/04
proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods  
Validation Methods of Peptide Identification Results in Proteomics br 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125
作者:  Zhou, Wen-Jing;  Zeng, Wen-Feng;  Chi, Hao;  He, Si-Min
收藏  |  浏览/下载：23/0  |  提交时间：2023/12/04
proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods  
蛋白质组学肽段鉴定可信度评价方法 期刊论文
生物化学与生物物理进展, 2023, 卷号: 50, 期号: 1, 页码: 109
作者:  周文婧;  曾文锋;  迟浩;  贺思敏
收藏  |  浏览/下载：2/0  |  提交时间：2024/05/20
proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods  蛋白质组学  质谱分析  目标-诱饵库方法  假发现率  可信度评价方法  
BhBF: A Bloom Filter Using B-h Sequences for Multi-set Membership Query 期刊论文
ACM TRANSACTIONS ON KNOWLEDGE DISCOVERY FROM DATA, 2022, 卷号: 16, 期号: 5, 页码: 26
作者:  Pei, Shuyu;  Xie, Kun;  Wang, Xin;  Xie, Gaogang;  Li, Kenli;  Li, Wei;  Li, Yanbiao;  Wen, Jigang
收藏  |  浏览/下载：22/0  |  提交时间：2022/12/07
Multi-set membership query  bloom filter  
Null-free False Discovery Rate Control Using Decoy Permutations 期刊论文
ACTA MATHEMATICAE APPLICATAE SINICA-ENGLISH SERIES, 2022, 卷号: 38, 期号: 2, 页码: 235-253
作者:  He, Kun;  Li, Meng-jie;  Fu, Yan;  Gong, Fu-zhou;  Sun, Xiao-ming
收藏  |  浏览/下载：23/0  |  提交时间：2022/12/07
multiple testing  false discovery rate  null distribution-free  p-value-free  decoy permutations  knockoff filter  
Open-pFind Verified Four Missing Proteins from Multi-Tissues 期刊论文
JOURNAL OF PROTEOME RESEARCH, 2020, 卷号: 19, 期号: 12, 页码: 4808-4814
作者:  Wu, Shujia;  Sun, Jinshuai;  Wang, Xi;  Xu, Feng;  Chi, Hao;  Li, Yanchang;  Zhong, Bowen;  Xie, Yuping;  Yan, Zhonghua;  Chang, Lei;  Wang, Dongxue;  He, Fuchu;  Wu, Junzhu;  Zhang, Yao;  Xu, Ping
收藏  |  浏览/下载：39/0  |  提交时间：2021/12/01
Chromosome-Centric Human Proteome Project  missing proteins  open-pFind  multiple tissues  
pValid: Validation Beyond the Target-Decoy Approach for Peptide Identification in Shotgun Proteomics 期刊论文
JOURNAL OF PROTEOME RESEARCH, 2019, 卷号: 18, 期号: 7, 页码: 2747-2758
作者:  Zhou, Wen-Jing;  Yang, Hao;  Zeng, Wen-Feng;  Zhang, Kun;  Chi, Hao;  He, Si-Min
收藏  |  浏览/下载：247/0  |  提交时间：2019/08/16
tandem mass spectrometry  target-decoy approach  validation methods  false-positive rate  false-negative rate  
pGlyco 2.0 enables precision N-glycoproteomics with comprehensive quality control and one-step mass spectrometry for intact glycopeptide identification 期刊论文
NATURE COMMUNICATIONS, 2017, 卷号: 8, 页码: 14
作者:  Liu, Ming-Qi;  Zeng, Wen-Feng;  Fang, Pan;  Cao, Wei-Qian;  Liu, Chao;  Yan, Guo-Quan;  Zhang, Yang;  Peng, Chao;  Wu, Jian-Qiang;  Zhang, Xiao-Jin;  Tu, Hui-Jun;  Chi, Hao;  Sun, Rui-Xiang;  Cao, Yong;  Dong, Meng-Qiu;  Jiang, Bi-Yun;  Huang, Jiang-Ming;  Shen, Hua-Li;  Wong, Catherine C. L.;  He, Si-Min;  Yang, Peng-Yuan
收藏  |  浏览/下载：79/0  |  提交时间：2019/12/12
pGlyco: a pipeline for the identification of intact N-glycopeptides by using HCD-and CID-MS/MS and MS3 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6, 页码: 10
作者:  Zeng, Wen-Feng;  Liu, Ming-Qi;  Zhang, Yang;  Wu, Jian-Qiang;  Fang, Pan;  Peng, Chao;  Nie, Aiying;  Yan, Guoquan;  Cao, Weiqian;  Liu, Chao;  Chi, Hao;  Sun, Rui-Xiang;  Wong, Catherine C. L.;  He, Si-Min;  Yang, Pengyuan
收藏  |  浏览/下载：70/0  |  提交时间：2019/12/13
A note on the false discovery rate of novel peptides in proteogenomics 期刊论文
BIOINFORMATICS, 2015, 卷号: 31, 期号: 20, 页码: 3249-3253
作者:  Zhang, Kun;  Fu, Yan;  Zeng, Wen-Feng;  He, Kun;  Chi, Hao;  Liu, Chao;  Li, Yan-Chang;  Gao, Yuan;  Xu, Ping;  He, Si-Min
收藏  |  浏览/下载：53/0  |  提交时间：2019/12/13