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Improve the Resolution and Parallel Performance of the Three-Dimensional Refine Algorithm in RELION Using CUDA and MPI 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2021, 卷号: 18, 期号: 2, 页码: 583-595
作者:  Zhang, Jingrong;  Wang, Zihao;  Liu, Zhiyong;  Zhang, Fa
收藏  |  浏览/下载:37/0  |  提交时间:2021/12/01
Memory management  Graphics processing units  Arrays  Statistical analysis  Three-dimensional displays  cryoEM  RELION  CUDA  statistical method  Top-k selection  
Live-SIMBA: an ImageJ plug-in for the universal and accelerated single molecule-guided Bayesian localization super resolution microscopy (SIMBA) method 期刊论文
BIOMEDICAL OPTICS EXPRESS, 2020, 卷号: 11, 期号: 10, 页码: 5842-5859
作者:  Li, Hongjia;  Xu, Fan;  Gao, Shan;  Zhang, Mingshu;  Xue, Fudong;  Xu, Pingyong;  Zhang, Fa
收藏  |  浏览/下载:48/0  |  提交时间:2020/12/10
Fast Super-Resolution Imaging Technique and Immediate Early Nanostructure Capturing by a Photoconvertible Fluorescent Protein 期刊论文
NANO LETTERS, 2020, 卷号: 20, 期号: 4, 页码: 2197-2208
作者:  Zhang, Mingshu;  Fu, Zhifei;  Li, Changqing;  Liu, Anyuan;  Peng, Dingming;  Xue, Fudong;  He, Wenting;  Gao, Shan;  Xu, Fan;  Xu, Dan;  Yuan, Ling;  Zhang, Fa;  Xu, Zhiheng;  Xu, Tao;  Xu, Pingyong
收藏  |  浏览/下载:53/0  |  提交时间:2020/12/10
Photoconvertible fluorescent protein  live super-resolution microscopy  Drosophila embryos  Quick-SIMBA  pcStar  
Study protocol for a parallel-group, double-blinded, randomized, controlled, noninferiority trial: the effect and safety of hybrid electroconvulsive therapy (Hybrid-ECT) compared with routine electroconvulsive therapy in patients with depression 期刊论文
BMC PSYCHIATRY, 2019, 卷号: 19, 期号: 1, 页码: 9
作者:  Rong, Han;  Xu, Shu-xian;  Zeng, Jing;  Yang, Ying-jia;  Zhao, Jie;  Lai, Wen-tao;  Chen, Li-chang;  Deng, Wen-feng;  Zhang, Xiangyang;  Zhang, Ying-li;  Li, Min-zhi;  Xiao, Li;  Xie, Xin-hui
收藏  |  浏览/下载:47/0  |  提交时间:2020/12/10
Study protocol  Randomized controlled trial  Hybrid electroconvulsive therapy  Electroconvulsive therapy  Depression  
Fine-grained alignment of cryo-electron subtomograms based on MPI parallel optimization 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 13
作者:  Lu, Yongchun;  Zeng, Xiangrui;  Zhao, Xiaofang;  Li, Shirui;  Li, Hua;  Gao, Xin;  Xu, Min
收藏  |  浏览/下载:76/0  |  提交时间:2019/12/10
Stochastic average gradient  Fine-grained alignment  Cryo-ET  MPI  
A reconfigurable 4-GS/s power-efficient floating-point FFT processor design and implementation based on single-sided binary-tree decomposition 期刊论文
INTEGRATION-THE VLSI JOURNAL, 2019, 卷号: 66, 页码: 164-172
作者:  Wei, Xing;  Yang, Haigang;  Li, Wei;  Huang, Zhihong;  Yin, Tao;  Yu, Le
收藏  |  浏览/下载:85/0  |  提交时间:2019/08/16
Floating-point  Fast fourier transform (FFT)  Mixed-radix  Multi-path delay feedback (MDF)  Binary-tree decomposition  Twiddle factor  Fused FP arithmetic unit  
Automated and precise event detection method for big data in biomedical imaging with support vector machine 期刊论文
COMPUTER SYSTEMS SCIENCE AND ENGINEERING, 2018, 卷号: 33, 期号: 2, 页码: 105-114
作者:  Yuan, Lufeng;  Yao, Erlin;  Tan, Guangming
收藏  |  浏览/下载:48/0  |  提交时间:2019/04/03
Biomedical imaging  event detection  machine learning  support vector machine  big data  
GPU Computing based fast discrete wavelet transform for l(1)-regularized SPIRiT reconstruction 期刊论文
IMAGING SCIENCE JOURNAL, 2018, 卷号: 66, 期号: 7, 页码: 393-408
作者:  Yao, Tiechui;  Xiao, Li;  Zhao, Di;  Sun, Yuzhong
收藏  |  浏览/下载:63/0  |  提交时间:2019/12/10
Fast discrete wavelet transform  MRI reconstruction  parallel imaging  compressed sensing  regularization  GPU computing  
Real-Time Big Data Analytical Architecture for Remote Sensing Application 期刊论文
IEEE JOURNAL OF SELECTED TOPICS IN APPLIED EARTH OBSERVATIONS AND REMOTE SENSING, 2015, 卷号: 8, 期号: 10, 页码: 4610-4621
作者:  Rathore, Muhammad Mazhar Ullah;  Paul, Anand;  Ahmad, Awais;  Chen, Bo-Wei;  Huang, Bormin;  Ji, Wen
收藏  |  浏览/下载:38/0  |  提交时间:2019/12/13
Big Data  data analysis decision unit (DADU)  data processing unit (DPU)  land and sea area  offline  real-time  remote senses  remote sensing Big Data acquisition unit (RSDU)  
SuperDragon: A Heterogeneous Parallel System for Accelerating 3D Reconstruction of Cryo-Electron Microscopy Images 期刊论文
ACM TRANSACTIONS ON RECONFIGURABLE TECHNOLOGY AND SYSTEMS, 2015, 卷号: 8, 期号: 4, 页码: 22
作者:  Tan, Guangming;  Zhang, Chunming;  Wang, Wendi;  Zhang, Peiheng
收藏  |  浏览/下载:44/0  |  提交时间:2019/12/13
Design  Performance  Cryo-EM  3D reconstruction  heterogeneous  FPGA