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Filling gaps of genome scaffolds via probabilistic searching optical maps against assembly graph 期刊论文
BMC Bioinformatics, 2021, 卷号: 22, 期号: 1
作者:  Huang,Bin;  Wei,Guozheng;  Wang,Bing;  Ju,Fusong;  Zhong,Yi;  Shi,Zhuozheng;  Sun,Shiwei;  Bu,Dongbo
收藏  |  浏览/下载:50/0  |  提交时间:2021/12/01
Genome assembly  Gap filling  Scaffolding  Optical maps  Probabilistic search  
Richer fusion network for breast cancer classification based on multimodal data 期刊论文
BMC Medical Informatics and Decision Making, 2021, 卷号: 21, 期号: Suppl 1
作者:  Yan,Rui;  Zhang,Fa;  Rao,Xiaosong;  Lv,Zhilong;  Li,Jintao;  Zhang,Lingling;  Liang,Shuang;  Li,Yilin;  Ren,Fei;  Zheng,Chunhou;  Liang,Jun
收藏  |  浏览/下载:43/0  |  提交时间:2021/12/01
Pathological image  Electronic medical record  Multimodal fusion  Breast cancer classification  Convolutional neural network  
Analysis of codon usage patterns in citrus based on coding sequence data 期刊论文
BMC Genomics, 2020, 卷号: 21, 期号: Suppl 5
作者:  Shen,Zenan;  Gan,Zhimeng;  Zhang,Fa;  Yi,Xinyao;  Zhang,Jinzhi;  Wan,Xiaohua
收藏  |  浏览/下载:69/0  |  提交时间:2021/12/01
Citrus  Codon usage  GC biology  Evolution  Correlation  
Improving prediction of burial state of residues by exploiting correlation among residues 期刊论文
BMC BIOINFORMATICS, 2017, 卷号: 18, 页码: 11
作者:  Gong, Hai'e;  Zhang, Haicang;  Zhu, Jianwei;  Wang, Chao;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载:64/0  |  提交时间:2019/12/12
Protein structure  Burial states of residue  Conditional random field  Residue correlation  
Condensing Raman spectrum for single-cell phenotype analysis 期刊论文
BMC Bioinformatics, 2015, 卷号: 16, 期号: Suppl 18
作者:  Sun,Shiwei;  Wang,Xuetao;  Gao,Xin;  Ren,Lihui;  Su,Xiaoquan;  Bu,Dongbo;  Ning,Kang
收藏  |  浏览/下载:110/0  |  提交时间:2019/08/16
Raman Spectrum  Linear Discriminant Analysis (LDA)  K Nearest Neighbor(k-NN)  Discretization  
Preliminary expression profile of cytokines in brain tissue of BALB/c mice with Angiostrongylus cantonensis infection 期刊论文
PARASITES & VECTORS, 2015, 卷号: 8, 页码: 10
作者:  Yu, Liping;  Wu, Xiaoying;  Wei, Jie;  Liao, Qi;  Xu, Lian;  Luo, Siqi;  Zeng, Xin;  Zhao, Yi;  Lv, Zhiyue;  Wu, Zhongdao
收藏  |  浏览/下载:62/0  |  提交时间:2019/12/13
Angiostrongylus cantonensis  Eosinophil  Mouse model  Cytokine  Chemokine  
OpenMS-Simulator: an open-source software for theoretical tandem mass spectrum prediction 期刊论文
BMC Bioinformatics, 2015, 卷号: 16, 期号: 1
作者:  Wang,Yaojun;  Yang,Fei;  Wu,Peng;  Bu,Dongbo;  Sun,Shiwei
收藏  |  浏览/下载:59/0  |  提交时间:2019/12/10
Mass spectrometry  Theoretical spectrum prediction  Peptide identification  
SWAP-Assembler: scalable and efficient genome assembly towards thousands of cores 期刊论文
BMC Bioinformatics, 2014, 卷号: 15, 期号: Suppl 9
作者:  Meng,Jintao;  Wang,Bingqiang;  Wei,Yanjie;  Feng,Shengzhong;  Balaji,Pavan
收藏  |  浏览/下载:55/0  |  提交时间:2019/08/16
genome assembly  parallel computing  De Bruijn graph  
Accelerating the scoring module of mass spectrometry-based peptide identification using GPUs 期刊论文
BMC Bioinformatics, 2014, 卷号: 15, 期号: 1
作者:  Li,You;  Chi,Hao;  Xia,Leihao;  Chu,Xiaowen
收藏  |  浏览/下载:50/0  |  提交时间:2019/08/16
High-performance blob-based iterative three-dimensional reconstruction in electron tomography using multi-GPUs 期刊论文
BMC Bioinformatics, 2012, 卷号: 13, 期号: Suppl 10
作者:  Wan,Xiaohua;  Zhang,Fa;  Chu,Qi;  Liu,Zhiyong
收藏  |  浏览/下载:54/0  |  提交时间:2019/08/16