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AutoGDeterm: Automatic Geometry Determination for Electron Tomography 期刊论文
TSINGHUA SCIENCE AND TECHNOLOGY, 2018, 卷号: 23, 期号: 4, 页码: 369-376
作者:  Chen, Yu;  Wang, Zihao;  Li, Lun;  Zhang, Jingrong;  Wan, Xiaohua;  Sun, Fei;  Zhang, Fa
收藏  |  浏览/下载:78/0  |  提交时间:2019/12/10
electron tomography  geometry determination  human intervention  full automation  AutoGDeterm  comparable accuracy  
Computer-Aided Detection of Pulmonary Nodules in Computed Tomography Images: Effect on Observer Performance 期刊论文
JOURNAL OF MEDICAL IMAGING AND HEALTH INFORMATICS, 2017, 卷号: 7, 期号: 6, 页码: 1205-1211
作者:  Liu, JiaBao;  Wang, Yu;  Zhang, Fa;  Ren, Fei;  Liu, LiHeng;  He, Wen
收藏  |  浏览/下载:81/0  |  提交时间:2019/12/12
Computer-Aided Detection  Model Learning  Lung Nodule  Computed Tomography  
AuTom: A novel automatic platform for electron tomography reconstruction 期刊论文
JOURNAL OF STRUCTURAL BIOLOGY, 2017, 卷号: 199, 期号: 3, 页码: 196-208
作者:  Han, Renmin;  Wan, Xiaohua;  Wang, Zihao;  Hao, Yu;  Zhang, Jingrong;  Chen, Yu;  Gao, Xin;  Liu, Zhiyong;  Ren, Fei;  Sun, Fei;  Zhang, Fa
收藏  |  浏览/下载:59/0  |  提交时间:2019/12/12
Electron tomography  Alignment  Reconstruction  Image processing workflow  
A Two-Phase Improved Correlation Method for Automatic Particle Selection in Cryo-EM 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2017, 卷号: 14, 期号: 2, 页码: 316-325
作者:  Zhang, Fa;  Chen, Yu;  Ren, Fei;  Wang, Xuan;  Liu, Zhiyong;  Wan, Xiaohua
收藏  |  浏览/下载:63/0  |  提交时间:2019/12/12
Particle selection  feature-based  template-matching  rotation-invariant feature  correlation score functions  
ICON: 3D reconstruction with 'missing-information' restoration in biological electron tomography 期刊论文
JOURNAL OF STRUCTURAL BIOLOGY, 2016, 卷号: 195, 期号: 1, 页码: 100-112
作者:  Deng, Yuchen;  Chen, Yu;  Zhang, Yan;  Wang, Shengliu;  Zhang, Fa;  Sun, Fei
收藏  |  浏览/下载:57/0  |  提交时间:2019/12/13
Compressed sensing  Electron tomography  Missing wedge  NUFFT  Sub-tomogram averaging  
FIRT: Filtered iterative reconstruction technique with information restoration 期刊论文
JOURNAL OF STRUCTURAL BIOLOGY, 2016, 卷号: 195, 期号: 1, 页码: 49-61
作者:  Chen, Yu;  Zhang, Yan;  Zhang, Kai;  Deng, Yuchen;  Wang, Shengliu;  Zhang, Fa;  Sun, Fei
收藏  |  浏览/下载:60/0  |  提交时间:2019/12/13
Algebra reconstruction technique  Electron tomography  Filtered iterative reconstruction technique  Information restoration  Nonlinear diffusion filter  
A local-optimization refinement algorithm in single particle analysis for macromolecular complex with multiple rigid modules 期刊论文
PROTEIN & CELL, 2016, 卷号: 7, 期号: 1, 页码: 46-62
作者:  Shan, Hong;  Wang, Zihao;  Zhang, Fa;  Xiong, Yong;  Yin, Chang-Cheng;  Sun, Fei
收藏  |  浏览/下载:58/0  |  提交时间:2019/12/13
cryo-electron microscopy  single particle analysis  conformational heterogeneity  rigid module  local optimization refinement  
A novel fully automatic scheme for fiducial marker-based alignment in electron tomography 期刊论文
JOURNAL OF STRUCTURAL BIOLOGY, 2015, 卷号: 192, 期号: 3, 页码: 403-417
作者:  Han, Renmin;  Wang, Liansan;  Liu, Zhiyong;  Sun, Fei;  Zhang, Fa
收藏  |  浏览/下载:53/0  |  提交时间:2019/12/13
Electron tomography  Alignment  Point set registration  Four point invariant  
FASART: An iterative reconstruction algorithm with inter-iteration adaptive NAD filter 期刊论文
BIO-MEDICAL MATERIALS AND ENGINEERING, 2015, 卷号: 26, 页码: S1409-S1415
作者:  Zhou, Ziying;  Li, Yugang;  Zhang, Fa;  Wan, Xiaohua
收藏  |  浏览/下载:47/0  |  提交时间:2019/12/13
electron tomography (ET)  3D reconstruction  iterative method  non-linear anisotropic diffusion (NAD) filter