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Self-supervised noise modeling and sparsity guided electron tomography volumetric image denoising 期刊论文
ULTRAMICROSCOPY, 2024, 卷号: 255, 页码: 11
作者:  Yang, Zhidong;  Zang, Dawei;  Li, Hongjia;  Zhang, Zhao;  Zhang, Fa;  Han, Renmin
收藏  |  浏览/下载：2/0  |  提交时间：2024/05/20
Electron tomography  Image denoising  Self-supervised learning  
Determining protein structures in cellular lamella at pseudo-atomic resolution by GisSPA 期刊论文
NATURE COMMUNICATIONS, 2023, 卷号: 14, 期号: 1, 页码: 9
作者:  Cheng, Jing;  Liu, Tong;  You, Xin;  Zhang, Fa;  Sui, Sen-Fang;  Wan, Xiaohua;  Zhang, Xinzheng
收藏  |  浏览/下载：7/0  |  提交时间：2023/12/04
Correction of image distortion in large-field ssEM stitching by an unsupervised intermediate-space solving network 期刊论文
BIOINFORMATICS, 2022, 卷号: 38, 期号: 20, 页码: 4797-4805
作者:  He, Bintao;  Zhang, Yan;  Zhang, Fa;  Han, Renmin
收藏  |  浏览/下载：13/0  |  提交时间：2023/07/12
Noise-Transfer2Clean: denoising cryo-EM images based on noise modeling and transfer 期刊论文
BIOINFORMATICS, 2022, 页码: 8
作者:  Li, Hongjia;  Zhang, Hui;  Wan, Xiaohua;  Yang, Zhidong;  Li, Chengmin;  Li, Jintao;  Han, Renmin;  Zhu, Ping;  Zhang, Fa
收藏  |  浏览/下载：19/0  |  提交时间：2022/12/07
Macromolecules Structural Classification With a 3D Dilated Dense Network in Cryo-Electron Tomography 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2022, 卷号: 19, 期号: 1, 页码: 209-219
作者:  Gao, Shan;  Han, Renmin;  Zeng, Xiangrui;  Liu, Zhiyong;  Xu, Min;  Zhang, Fa
收藏  |  浏览/下载：18/0  |  提交时间：2022/12/07
Cryo-electron tomography  image classification  convolution neural network  
DETECTOR: structural information guided artifact detection for super-resolution fluorescence microscopy image 期刊论文
BIOMEDICAL OPTICS EXPRESS, 2021, 卷号: 12, 期号: 9, 页码: 5751-5769
作者:  Gao, Shan;  Xu, Fan;  Li, Hongjia;  Xue, Fudong;  Zhang, Mingshu;  Xu, Pingyong;  Zhang, Fa
收藏  |  浏览/下载：36/0  |  提交时间：2021/12/01
Multi-labelled proteins recognition for high-throughput microscopy images using deep convolutional neural networks 期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: SUPPL 3, 页码: 14
作者:  Zhang, Enze;  Zhang, Boheng;  Hu, Shaohan;  Zhang, Fa;  Liu, Zhiyong;  Wan, Xiaohua
收藏  |  浏览/下载：36/0  |  提交时间：2021/12/01
Protein pattern recognition  DNNs  Multi-class and multi-label  Label imbalance  High-throughput microscopy images  
Compressed sensing improved iterative reconstruction-reprojection algorithm for electron tomography 期刊论文
BMC BIOINFORMATICS, 2020, 卷号: 21, 页码: 19
作者:  Li, Lun;  Han, Renmin;  Zhang, Zhaotian;  Guo, Tiande;  Liu, Zhiyong;  Zhang, Fa
收藏  |  浏览/下载：29/0  |  提交时间：2021/12/01
Electron tomography  Compressed sensing  Matching pursuit  Iterative reconstruction-reprojection  
Live-SIMBA: an ImageJ plug-in for the universal and accelerated single molecule-guided Bayesian localization super resolution microscopy (SIMBA) method 期刊论文
BIOMEDICAL OPTICS EXPRESS, 2020, 卷号: 11, 期号: 10, 页码: 5842-5859
作者:  Li, Hongjia;  Xu, Fan;  Gao, Shan;  Zhang, Mingshu;  Xue, Fudong;  Xu, Pingyong;  Zhang, Fa
收藏  |  浏览/下载：48/0  |  提交时间：2020/12/10
A Parallel Cerebrovascular Segmentation Algorithm Based on Focused Multi-Gaussians Model and Heterogeneous Markov Random Field 期刊论文
IEEE TRANSACTIONS ON NANOBIOSCIENCE, 2020, 卷号: 19, 期号: 3, 页码: 538-546
作者:  Lv, Zhilong;  Mi, Fubo;  Wu, Zhongke;  Zhu, Yicheng;  Liu, Xinyu;  Tian, Mei;  Zhang, Fa;  Wang, Xingce;  Wan, Xiaohua
收藏  |  浏览/下载：56/0  |  提交时间：2020/12/10
Gaussian distribution  Image segmentation  Particle swarm optimization  Optimization  Histograms  Markov random fields  Robustness  Three-dimensional cerebrovascular segmentation  focused multi-Gaussians model  Chaotic oscillation particle swarm optimization  Markov random field