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Robust projection parameter calibration in cryo-ET with L1-norm optimization 期刊论文
ULTRAMICROSCOPY, 2025, 卷号: 274, 页码: 10
作者:  Guo, Shengkai;  Xu, Zihe;  Li, Xinyan;  Yang, Zhidong;  Feng, Chenjie;  Han, Renmin
收藏  |  浏览/下载：6/0  |  提交时间：2025/12/03
Cryo-ET  Fiducial marker-based alignment  Smoothing approximation  
Central Feature Network Enables Accurate Detection of Both Small and Large Particles in Cryo-Electron Tomography 期刊论文
JOURNAL OF COMPUTER SCIENCE AND TECHNOLOGY, 2025, 页码: 13
作者:  Wang, Yao-Yu;  Wan, Xiao-Hua;  Chen, Cheng;  Zhang, Fa;  Cui, Xue-Feng
收藏  |  浏览/下载：4/0  |  提交时间：2025/12/03
particle detection  cryo-electron tomography  pattern recognition  deep learning  
TiltRec: an ultra-fast and open-source toolkit for cryo-electron tomographic reconstruction 期刊论文
BIOINFORMATICS, 2025, 卷号: 41, 期号: 3, 页码: 5
作者:  Jiao, Yanxin;  Li, Hongjia;  Xue, Yang;  Yang, Guoliang;  Qi, Lei;  Zhang, Fa;  Zang, Dawei;  Han, Renmin
收藏  |  浏览/下载：14/0  |  提交时间：2025/06/25
Improved Denoising of Cryo-Electron Microscopy Micrographs with Simulation-Aware Pretraining 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2024, 页码: 12
作者:  Yang, Zhidong;  Li, Hongjia;  Zang, Dawei;  Han, Renmin;  Zhang, Fa
收藏  |  浏览/下载：35/0  |  提交时间：2024/12/06
cryo-EM  image denoising  noise simulation and deep learning  
Self-supervised noise modeling and sparsity guided electron tomography volumetric image denoising 期刊论文
ULTRAMICROSCOPY, 2024, 卷号: 255, 页码: 11
作者:  Yang, Zhidong;  Zang, Dawei;  Li, Hongjia;  Zhang, Zhao;  Zhang, Fa;  Han, Renmin
收藏  |  浏览/下载：43/0  |  提交时间：2024/05/20
Electron tomography  Image denoising  Self-supervised learning  
HycDemux: a hybrid unsupervised approach for accurate barcoded sample demultiplexing in nanopore sequencing 期刊论文
GENOME BIOLOGY, 2023, 卷号: 24, 期号: 1, 页码: 29
作者:  Han, Renmin;  Qi, Junhai;  Xue, Yang;  Sun, Xiujuan;  Zhang, Fa;  Gao, Xin;  Li, Guojun
收藏  |  浏览/下载：62/0  |  提交时间：2023/12/04
Nanopore sequencing  Demultiplexing  Clustering  
Correction of image distortion in large-field ssEM stitching by an unsupervised intermediate-space solving network 期刊论文
BIOINFORMATICS, 2022, 卷号: 38, 期号: 20, 页码: 4797-4805
作者:  He, Bintao;  Zhang, Yan;  Zhang, Fa;  Han, Renmin
收藏  |  浏览/下载：41/0  |  提交时间：2023/07/12
Divide-and-Attention Network for HE-Stained Pathological Image Classification 期刊论文
BIOLOGY-BASEL, 2022, 卷号: 11, 期号: 7, 页码: 17
作者:  Yan, Rui;  Yang, Zhidong;  Li, Jintao;  Zheng, Chunhou;  Zhang, Fa
收藏  |  浏览/下载：67/0  |  提交时间：2022/12/07
pathological image classification  attention mechanism  convolutional neural network  knowledge embedding  
Nuclei-Guided Network for Breast Cancer Grading in HE-Stained Pathological Images 期刊论文
SENSORS, 2022, 卷号: 22, 期号: 11, 页码: 15
作者:  Yan, Rui;  Ren, Fei;  Li, Jintao;  Rao, Xiaosong;  Lv, Zhilong;  Zheng, Chunhou;  Zhang, Fa
收藏  |  浏览/下载：69/0  |  提交时间：2022/12/07
breast cancer grading  histopathological image  nuclei segmentation  convolutional neural network  attention mechanism  
VP-Detector: A 3D multi-scale dense convolutional neural network for macromolecule localization and classification in cryo-electron tomograms 期刊论文
COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 2022, 卷号: 221, 页码: 14
作者:  Hao, Yu;  Wan, Xiaohua;  Yan, Rui;  Liu, Zhiyong;  Li, Jintao;  Zhang, Shihua;  Cui, Xuefeng;  Zhang, Fa
收藏  |  浏览/下载：53/0  |  提交时间：2023/07/12
Cryo-ET  Sub-tomogram averaging  Particle localization  Particle classification  Convolutional neural networks