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Improved Denoising of Cryo-Electron Microscopy Micrographs with Simulation-Aware Pretraining 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2024, 页码: 12
作者:  Yang, Zhidong;  Li, Hongjia;  Zang, Dawei;  Han, Renmin;  Zhang, Fa
收藏  |  浏览/下载:1/0  |  提交时间:2024/12/06
cryo-EM  image denoising  noise simulation and deep learning  
MarkerDetector: A method for robust fiducial marker detection in electron micrographs using wavelet-based template 期刊论文
JOURNAL OF STRUCTURAL BIOLOGY, 2024, 卷号: 216, 期号: 1, 页码: 13
作者:  Hou, Gaoxin;  Yang, Zhidong;  Zang, Dawei;  Fernandez, Jose-Jesus;  Zhang, Fa;  Han, Renmin
收藏  |  浏览/下载:13/0  |  提交时间:2024/05/20
Electron microscopy  Wavelet transform  Template matching  Fiducial marker detection  
Sparse and Hierarchical Transformer for Survival Analysis on Whole Slide Images 期刊论文
IEEE JOURNAL OF BIOMEDICAL AND HEALTH INFORMATICS, 2024, 卷号: 28, 期号: 1, 页码: 7-18
作者:  Yan, Rui;  Lv, Zhilong;  Yang, Zhidong;  Lin, Senlin;  Zheng, Chunhou;  Zhang, Fa
收藏  |  浏览/下载:10/0  |  提交时间:2024/05/20
Hierarchical representation  pathological image analysis  sparse transformer  survival analysis  
Self-supervised noise modeling and sparsity guided electron tomography volumetric image denoising 期刊论文
ULTRAMICROSCOPY, 2024, 卷号: 255, 页码: 11
作者:  Yang, Zhidong;  Zang, Dawei;  Li, Hongjia;  Zhang, Zhao;  Zhang, Fa;  Han, Renmin
收藏  |  浏览/下载:11/0  |  提交时间:2024/05/20
Electron tomography  Image denoising  Self-supervised learning  
Divide-and-Attention Network for HE-Stained Pathological Image Classification 期刊论文
BIOLOGY-BASEL, 2022, 卷号: 11, 期号: 7, 页码: 17
作者:  Yan, Rui;  Yang, Zhidong;  Li, Jintao;  Zheng, Chunhou;  Zhang, Fa
收藏  |  浏览/下载:34/0  |  提交时间:2022/12/07
pathological image classification  attention mechanism  convolutional neural network  knowledge embedding  
Noise-Transfer2Clean: denoising cryo-EM images based on noise modeling and transfer 期刊论文
BIOINFORMATICS, 2022, 页码: 8
作者:  Li, Hongjia;  Zhang, Hui;  Wan, Xiaohua;  Yang, Zhidong;  Li, Chengmin;  Li, Jintao;  Han, Renmin;  Zhu, Ping;  Zhang, Fa
收藏  |  浏览/下载:28/0  |  提交时间:2022/12/07