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The interplay between tissue-resident microbiome and host proteins by integrated multi-omics during progression of colorectal adenoma to carcinoma 期刊论文
IMETA, 2025, 页码: 37
作者:  Wu, Di;  Wang, An-Jun;  Bu, De-Chao;  Sun, Yan-Yan;  Li, Chen-Hao;  Hong, Yue-Mei;  Zhang, Shan;  Chen, Shi-Yang;  Zhou, Jin-An;  Zhang, Tian-Yi;  Yu, Min-Hao;  Ma, Yong-Jing;  Wang, Xiu-Li;  Xu, Jia;  He, Wei;  Heeschen, Christopher;  Chen, Jian-Feng;  Mao, Wen-Jun;  Ding, Hui;  Wu, Wen-Juan;  Zhao, Yi;  Wang, Hui;  Liu, Ning-Ning
收藏  |  浏览/下载：4/0  |  提交时间：2025/12/03
colorectal cancer  metagenomics  microbiota-host interaction  proteomics  tissue-resident microbiome  
Cell-GraphCompass: modeling single cells with graph structure foundation model 期刊论文
NATIONAL SCIENCE REVIEW, 2025, 卷号: 12, 期号: 10, 页码: 14
作者:  Fang, Chen;  Cui, Wentao;  Hu, Zhilong;  Liu, Wenhao;  Chen, Shubai;  Chang, Shaole;  Long, Qingqing;  Li, Cong;  Liu, Yana;  Jiang, Haiping;  Wang, Pengfei;  Pan, Jia;  Hu, Guoping;  Liu, Guole;  Meng, Zhen;  Zhou, Yuanchun;  Chen, Linghui;  Feng, Guihai;  Li, Xin
收藏  |  浏览/下载：4/0  |  提交时间：2025/12/03
single-cell  transcriptomics  foundation model  pre-training  graph neural network  knowledge embedding  
DeePMD-kit v3: A Multiple-Backend Framework for Machine Learning Potentials 期刊论文
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2025, 卷号: 21, 期号: 9, 页码: 4375-4385
作者:  Zeng, Jinzhe;  Zhang, Duo;  Peng, Anyang;  Zhang, Xiangyu;  He, Sensen;  Wang, Yan;  Liu, Xinzijian;  Bi, Hangrui;  Li, Yifan;  Cai, Chun;  Zhang, Chengqian;  Du, Yiming;  Zhu, Jia-Xin;  Mo, Pinghui;  Huang, Zhengtao;  Zeng, Qiyu;  Shi, Shaochen;  Qin, Xuejian;  Yu, Zhaoxi;  Luo, Chenxing;  Ding, Ye;  Liu, Yun-Pei;  Shi, Ruosong;  Wang, Zhenyu;  Bore, Sigbjorn Loland;  Chang, Junhan;  Deng, Zhe;  Ding, Zhaohan;  Han, Siyuan;  Jiang, Wanrun;  Ke, Guolin;  Liu, Zhaoqing;  Lu, Denghui;  Muraoka, Koki;  Oliaei, Hananeh;  Singh, Anurag Kumar;  Que, Haohui;  Xu, Weihong;  Xu, Zhangmancang;  Zhuang, Yong-Bin;  Dai, Jiayu;  Giese, Timothy J.;  Jia, Weile;  Xu, Ben;  York, Darrin M.;  Zhang, Linfeng;  Wang, Han
收藏  |  浏览/下载：15/0  |  提交时间：2025/06/25
29-Billion Atoms Molecular Dynamics Simulation With Ab Initio Accuracy on 35 Million Cores of New Sunway Supercomputer 期刊论文
IEEE TRANSACTIONS ON COMPUTERS, 2025, 卷号: 74, 期号: 5, 页码: 1634-1648
作者:  Wang, Xun;  Meng, Xiangyu;  Guo, Zhuoqiang;  Li, Mingzhen;  Liu, Lijun;  Li, Mingfan;  Xiao, Qian;  Zhao, Tong;  Sun, Ninghui;  Tan, Guangming;  Jia, Weile
收藏  |  浏览/下载：51/0  |  提交时间：2025/06/25
Atoms  Accuracy  Supercomputers  Optimization  Artificial neural networks  Force  Training  Fitting  Predictive models  Nuclear power generation  High Performance Computing  Molecular Dynamics  DeePMD  Parallel Optimization  New Sunway Supercomputer  
From Static to Dynamic: Adapting Landmark-Aware Image Models for Facial Expression Recognition in Videos 期刊论文
IEEE TRANSACTIONS ON AFFECTIVE COMPUTING, 2025, 卷号: 16, 期号: 2, 页码: 624-638
作者:  Chen, Yin;  Li, Jia;  Shan, Shiguang;  Wang, Meng;  Hong, Richang
收藏  |  浏览/下载：4/0  |  提交时间：2025/12/03
Adaptation models  Videos  Computational modeling  Feature extraction  Transformers  Task analysis  Face recognition  Dynamic facial expression recognition  emotion ambiguity  model adaptation  transfer learning  
DPA-2: a large atomic model as a multi-task learner 期刊论文
NPJ COMPUTATIONAL MATERIALS, 2024, 卷号: 10, 期号: 1, 页码: 15
作者:  Zhang, Duo;  Liu, Xinzijian;  Zhang, Xiangyu;  Zhang, Chengqian;  Cai, Chun;  Bi, Hangrui;  Du, Yiming;  Qin, Xuejian;  Peng, Anyang;  Huang, Jiameng;  Li, Bowen;  Shan, Yifan;  Zeng, Jinzhe;  Zhang, Yuzhi;  Liu, Siyuan;  Li, Yifan;  Chang, Junhan;  Wang, Xinyan;  Zhou, Shuo;  Liu, Jianchuan;  Luo, Xiaoshan;  Wang, Zhenyu;  Jiang, Wanrun;  Wu, Jing;  Yang, Yudi;  Yang, Jiyuan;  Yang, Manyi;  Gong, Fu-Qiang;  Zhang, Linshuang;  Shi, Mengchao;  Dai, Fu-Zhi;  York, Darrin M.;  Liu, Shi;  Zhu, Tong;  Zhong, Zhicheng;  Lv, Jian;  Cheng, Jun;  Jia, Weile;  Chen, Mohan;  Ke, Guolin;  Weinan, E.;  Zhang, Linfeng;  Wang, Han
收藏  |  浏览/下载：44/0  |  提交时间：2025/06/25
Medical image reconstruction with multi-level deep learning denoiser and tight frame regularization 期刊论文
APPLIED MATHEMATICS AND COMPUTATION, 2024, 卷号: 477, 页码: 19
作者:  Wu, Tingting;  Huang, Chaoyan;  Jia, Shilong;  Li, Wei;  Chan, Raymond;  Zeng, Tieyong;  Zhou, S. Kevin
收藏  |  浏览/下载：41/0  |  提交时间：2024/12/06
Medical image reconstruction  Multi-level wavelet convolutional neural  network  Tight frame  Proximal alternating minimization  Magnetic resonance imaging  Positron emission tomography  
IrGEMM: An Input-Aware Tuning Framework for Irregular GEMM on ARM and X86 CPUs 期刊论文
IEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS, 2024, 卷号: 35, 期号: 9, 页码: 1672-1689
作者:  Wei, Cunyang;  Jia, Haipeng;  Zhang, Yunquan;  Yao, Jianyu;  Li, Chendi;  Cao, Wenxuan
收藏  |  浏览/下载：34/0  |  提交时间：2024/12/06
Kernel  Libraries  Computer architecture  Tuning  Layout  Optimization  Codes  Batch GEMM  code generation  compact GEMM  dynamic programming  TSMM  
CORAL: A blockchain protocol for handling transactions with deadline constraints 期刊论文
COMPUTER NETWORKS, 2024, 卷号: 251, 页码: 14
作者:  Liu, Yanxiu;  Jia, Linpeng;  Wang, Xin;  Huang, Huawei;  Zhao, Qinglin;  Li, Zhongcheng;  Sun, Yi
收藏  |  浏览/下载：17/0  |  提交时间：2025/06/25
Blockchain  Deadline constraint  Consensus  Effective throughput  Transaction packing mechanism  
Enhancing Recommendation with Denoising Auxiliary Task 期刊论文
JOURNAL OF COMPUTER SCIENCE AND TECHNOLOGY, 2024, 卷号: 39, 期号: 5, 页码: 1123-1137
作者:  Liu, Peng-Sheng;  Zheng, Li-Nan;  Chen, Jia-Le;  Zhang, Guang-Fa;  Xu, Yang;  Fang, Jin-Yun
收藏  |  浏览/下载：38/0  |  提交时间：2025/06/25
auxiliary task learning  recommender system  sequence denoising