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A survey on deep learning-based algorithms for the traveling salesman problem 期刊论文
FRONTIERS OF COMPUTER SCIENCE, 2025, 卷号: 19, 期号: 6, 页码: 30
作者:  Sui, Jingyan;  Ding, Shizhe;  Huang, Xulin;  Yu, Yue;  Liu, Ruizhi;  Xia, Boyang;  Ding, Zhenxin;  Xu, Liming;  Zhang, Haicang;  Yu, Chungong;  Bu, Dongbo
收藏  |  浏览/下载：2/0  |  提交时间：2025/06/25
traveling salesman problem  algorithms design  deep learning  neural network  
Lossless data compression by large models 期刊论文
NATURE MACHINE INTELLIGENCE, 2025, 卷号: 7, 期号: 5, 页码: 794-799
作者:  Li, Ziguang;  Huang, Chao;  Wang, Xuliang;  Hu, Haibo;  Wyeth, Cole;  Bu, Dongbo;  Yu, Quan;  Gao, Wen;  Liu, Xingwu;  Li, Ming
收藏  |  浏览/下载：1/0  |  提交时间：2025/06/25
Cost-Effective DNA Storage System with DNA Movable Type 期刊论文
ADVANCED SCIENCE, 2024, 页码: 15
作者:  Wang, Chenyang;  Wei, Di;  Wei, Zheng;  Yang, Dongxin;  Xing, Jing;  Wang, Yunze;  Wang, Xiaotong;  Wang, Pei;  Ma, Guannan;  Zhang, Xinru;  Li, Haolan;  Tang, Chuan;  Hou, Pengfei;  Wang, Jie;  Gao, Renjun;  Xie, Guiqiu;  Li, Cuidan;  Ju, Yingjiao;  Wang, Peihan;  Yue, Liya;  Zhao, Yongliang;  Sheng, Yongjie;  Xiao, Jingfa;  Niu, Haitao;  Xu, Sihong;  Yang, Huaiyi;  Liu, Di;  Duan, Bo;  Bu, Dongbo;  Tan, Guangming;  Chen, Fei
收藏  |  浏览/下载：5/0  |  提交时间：2025/06/25
DNA data storage  DNA movable type  DNA-based storage  
GPCR-BSD: a database of binding sites of human G-protein coupled receptors under diverse states 期刊论文
BMC BIOINFORMATICS, 2024, 卷号: 25, 期号: 1, 页码: 16
作者:  Liu, Fan;  Zhou, Han;  Li, Xiaonong;  Zhou, Liangliang;  Yu, Chungong;  Zhang, Haicang;  Bu, Dongbo;  Liang, Xinmiao
收藏  |  浏览/下载：17/0  |  提交时间：2024/12/06
G-protein coupled receptor  State-specific structure  Binding site  Key residue  Database  
NIERT: Accurate Numerical Interpolation Through Unifying Scattered Data Representations Using Transformer Encoder 期刊论文
IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 2024, 卷号: 36, 期号: 11, 页码: 6731-6744
作者:  Ding, Shizhe;  Xia, Boyang;  Ren, Milong;  Bu, Dongbo
收藏  |  浏览/下载：2/0  |  提交时间：2025/06/25
Interpolation algorithm  pre-trained models  scattered data  transformer encoder  
Accurate and robust protein sequence design with CarbonDesign 期刊论文
NATURE MACHINE INTELLIGENCE, 2024, 卷号: 6, 期号: 5, 页码: 14
作者:  Ren, Milong;  Yu, Chungong;  Bu, Dongbo;  Zhang, Haicang
收藏  |  浏览/下载：46/0  |  提交时间：2024/12/06
Accurate prediction of RNA secondary structure including pseudoknots through solving minimum-cost flow with learned potentials 期刊论文
COMMUNICATIONS BIOLOGY, 2024, 卷号: 7, 期号: 1, 页码: 13
作者:  Gong, Tiansu;  Ju, Fusong;  Bu, Dongbo
收藏  |  浏览/下载：24/0  |  提交时间：2024/05/20
SASA-Net: A Spatial-Aware Self-Attention Mechanism for Building Protein 3D Structure Directly From Inter- Residue Distances 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2023, 卷号: 20, 期号: 6, 页码: 3482-3488
作者:  Gong, Tiansu;  Ju, Fusong;  Sun, Shiwei;  Bu, Dongbo
收藏  |  浏览/下载：46/0  |  提交时间：2024/05/20
Deep learning  protein structure prediction  
NeuralGLS: learning to guide local search with graph convolutional network for the traveling salesman problem 期刊论文
NEURAL COMPUTING & APPLICATIONS, 2023, 页码: 20
作者:  Sui, Jingyan;  Ding, Shizhe;  Xia, Boyang;  Liu, Ruizhi;  Bu, Dongbo
收藏  |  浏览/下载：32/0  |  提交时间：2023/12/04
Graph convolutional network  Guided local search  Traveling salesman problem  
Protein Structure Prediction: Challenges, Advances, and the Shift of Research Paradigms 期刊论文
GENOMICS PROTEOMICS & BIOINFORMATICS, 2023, 卷号: 21, 期号: 5, 页码: 913-925
作者:  Huang, Bin;  Kong, Lupeng;  Wang, Chao;  Ju, Fusong;  Zhang, Qi;  Zhu, Jianwei;  Gong, Tiansu;  Zhang, Haicang;  Yu, Chungong;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：25/0  |  提交时间：2024/05/20
Protein folding  Protein structure prediction  Deep learning  Transformer  Language model