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PepPre: Promote Peptide Identification Using Accurate and Comprehensive Precursors 期刊论文
JOURNAL OF PROTEOME RESEARCH, 2023, 卷号: 23, 期号: 2, 页码: 574-584
作者:  Tarn, Ching;  Wu, Yu-Zhuo;  Wang, Kai-Fei
收藏  |  浏览/下载：9/0  |  提交时间：2024/05/20
mass spectrometry  peptide identification  precursor ion detection  deisotope  linear programming  
Comparative Analysis of Chemical Cross-Linking Mass Spectrometry Data Indicates That Protein STY Residues Rarely React with N-Hydroxysuccinimide Ester Cross-Linkers 期刊论文
JOURNAL OF PROTEOME RESEARCH, 2023, 卷号: 22, 期号: 8, 页码: 2593-2607
作者:  Cao, Yong;  Liu, Xin-Tong;  Mao, Peng-Zhi;  Chen, Zhen-Lin;  Tarn, Ching;  Dong, Meng-Qiu
收藏  |  浏览/下载：13/0  |  提交时间：2023/12/04
CXMS  XL-MS  NHS ester cross-linker  pLink  xiSearch  MeroX  
Click-iG: Simultaneous Enrichment and Profiling of Intact N-linked, O-GalNAc, and O-GlcNAcylated Glycopeptides 期刊论文
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION, 2023, 页码: 12
作者:  Liu, Jialin;  Cheng, Bo;  Fan, Xinqi;  Zhou, Xinyue;  Wang, Jiankun;  Zhou, Wen;  Li, Hengyu;  Zeng, Wenfeng;  Yang, Pengyuan;  Chen, Xing
收藏  |  浏览/下载：18/0  |  提交时间：2023/12/04
Glycoproteomics  Glycosylation  Intact Glycosites  Metabolic Labeling  Unnatural Glycans  
XAI-enabled neural network analysis of metabolite spatial distributions 期刊论文
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2023, 页码: 12
作者:  Ma, Wenwu;  Luo, Lanfang;  Liang, Kun;  Liu, Taoyan;  Su, Jiali;  Wang, Yuefan;  Li, Jun;  Zhou, S. Kevin;  Shyh-Chang, Ng
收藏  |  浏览/下载：13/0  |  提交时间：2023/12/04
Mass spectrometry imaging  Deep neural networks  Feature extraction  Pathway analysis  Aging  
Validation Methods of Peptide Identification Results in Proteomics* 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125
作者:  Zhou Wen-Jing;  Zeng Wen-Feng;  Chi Hao;  He Si-Min
收藏  |  浏览/下载：13/0  |  提交时间：2023/12/04
proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods  
Validation Methods of Peptide Identification Results in Proteomics br 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125
作者:  Zhou, Wen-Jing;  Zeng, Wen-Feng;  Chi, Hao;  He, Si-Min
收藏  |  浏览/下载：34/0  |  提交时间：2023/12/04
proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods  
A universal database reduction method based on the sequence tag strategy to facilitate large-scale database search in proteomics 期刊论文
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2023, 卷号: 483, 页码: 11
作者:  Wang, Kai-Fei;  Wu, Yu-Zhuo;  Chi, Hao
收藏  |  浏览/下载：19/0  |  提交时间：2023/07/12
蛋白质组学肽段鉴定可信度评价方法 期刊论文
生物化学与生物物理进展, 2023, 卷号: 50, 期号: 1, 页码: 109
作者:  周文婧;  曾文锋;  迟浩;  贺思敏
收藏  |  浏览/下载：8/0  |  提交时间：2024/05/20
proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods  蛋白质组学  质谱分析  目标-诱饵库方法  假发现率  可信度评价方法  
GIPS-Mix for Accurate Identification of Isomeric Components in Glycan Mixtures Using Intelligent Group-Opting Strategy 期刊论文
ANALYTICAL CHEMISTRY, 2022, 页码: 9
作者:  Huang, Chuncui;  Hou, Meijie;  Yan, Jingyu;  Wang, Hui;  Wang, Yu;  Cao, Cuiyan;  Wang, Yaojun;  Gao, Huanyu;  Ma, Xinyue;  Zheng, Yi;  Bu, Dongbo;  Chai, Wengang;  Li, Yan;  Sun, Shiwei
收藏  |  浏览/下载：21/0  |  提交时间：2023/07/12
Vimentin binds to a novel tumor suppressor protein, GSPT1-238aa, encoded by circGSPT1 with a selective encoding priority to halt autophagy in gastric carcinoma 期刊论文
CANCER LETTERS, 2022, 卷号: 545, 页码: 14
作者:  Hu, Fan;  Peng, Yin;  Chang, Shanshan;  Luo, Xiaonuan;  Yuan, Yuan;  Zhu, Xiaohui;  Xu, Yidan;  Du, Kaining;  Chen, Yang;  Deng, Shiqi;  Yu, Fan;  Feng, Xianling;  Fan, Xinmin;  Ashktorab, Hassan;  Smoot, Duane;  Meltzer, Stephen J.;  Li, Song;  Wei, Yanjie;  Zhang, Xiaojing;  Jin, Zhe
收藏  |  浏览/下载：35/0  |  提交时间：2022/12/07
Circular RNAs  circGSPT1  Autophagy  Translation  Gastric cancer