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Self-supervised noise modeling and sparsity guided electron tomography volumetric image denoising 期刊论文
ULTRAMICROSCOPY, 2024, 卷号: 255, 页码: 11
作者:  Yang, Zhidong;  Zang, Dawei;  Li, Hongjia;  Zhang, Zhao;  Zhang, Fa;  Han, Renmin
收藏  |  浏览/下载:2/0  |  提交时间:2024/05/20
Electron tomography  Image denoising  Self-supervised learning  
Determining protein structures in cellular lamella at pseudo-atomic resolution by GisSPA 期刊论文
NATURE COMMUNICATIONS, 2023, 卷号: 14, 期号: 1, 页码: 9
作者:  Cheng, Jing;  Liu, Tong;  You, Xin;  Zhang, Fa;  Sui, Sen-Fang;  Wan, Xiaohua;  Zhang, Xinzheng
收藏  |  浏览/下载:7/0  |  提交时间:2023/12/04
Recent Progress in Chemical Cross-linking Coupled With Mass Spectrometry 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2022, 卷号: 49, 期号: 4, 页码: 737-758
作者:  Chen Zhen-Lin;  Cao Yong;  He Si-Min
收藏  |  浏览/下载:18/0  |  提交时间:2022/12/07
cross-linking mass spectrometry  protein structure  protein interaction  proteomics  mass spectrometry  
Noise-Transfer2Clean: denoising cryo-EM images based on noise modeling and transfer 期刊论文
BIOINFORMATICS, 2022, 页码: 8
作者:  Li, Hongjia;  Zhang, Hui;  Wan, Xiaohua;  Yang, Zhidong;  Li, Chengmin;  Li, Jintao;  Han, Renmin;  Zhu, Ping;  Zhang, Fa
收藏  |  浏览/下载:19/0  |  提交时间:2022/12/07
Improve the Resolution and Parallel Performance of the Three-Dimensional Refine Algorithm in RELION Using CUDA and MPI 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2021, 卷号: 18, 期号: 2, 页码: 583-595
作者:  Zhang, Jingrong;  Wang, Zihao;  Liu, Zhiyong;  Zhang, Fa
收藏  |  浏览/下载:37/0  |  提交时间:2021/12/01
Memory management  Graphics processing units  Arrays  Statistical analysis  Three-dimensional displays  cryoEM  RELION  CUDA  statistical method  Top-k selection  
Spark-based parallel calculation of 3D fourier shell correlation for macromolecule structure local resolution estimation 期刊论文
BMC BIOINFORMATICS, 2020, 卷号: 21, 页码: 18
作者:  Lue, Yongchun;  Zeng, Xiangrui;  Tian, Xinhui;  Shi, Xiao;  Wang, Hui;  Zheng, Xiaohui;  Liu, Xiaodong;  Zhao, Xiaofang;  Gao, Xin;  Xu, Min
收藏  |  浏览/下载:52/0  |  提交时间:2020/12/10
3D local Fourier shell correlation  3D local resolution map  Key-value data  Spark  3D array partition  
Fine-grained alignment of cryo-electron subtomograms based on MPI parallel optimization 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 13
作者:  Lu, Yongchun;  Zeng, Xiangrui;  Zhao, Xiaofang;  Li, Shirui;  Li, Hua;  Gao, Xin;  Xu, Min
收藏  |  浏览/下载:76/0  |  提交时间:2019/12/10
Stochastic average gradient  Fine-grained alignment  Cryo-ET  MPI  
PIXER: an automated particle-selection method based on segmentation using a deep neural network 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 14
作者:  Zhang, Jingrong;  Wang, Zihao;  Chen, Yu;  Han, Renmin;  Liu, Zhiyong;  Sun, Fei;  Zhang, Fa
收藏  |  浏览/下载:75/0  |  提交时间:2019/04/03
Cryo-electron microscope  Single-particle analysis  Deep learning  Particle selection  Segmentation  
无权访问的条目 学位论文
作者:  陈庾
Adobe PDF(13078Kb)  |  收藏  |  浏览/下载:0/0  |  提交时间:2018/06/22
无权访问的条目 学位论文
作者:  王迎瑞
Adobe PDF(6567Kb)  |  收藏  |  浏览/下载:0/0  |  提交时间:2017/07/05