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Resilience of human gut microbial communities for the long stay with multiple dietary shifts 期刊论文
GUT, 2019, 卷号: 68, 期号: 12, 页码: 2254-+
作者:  Liu, Hong;  Han, Maozhen;  Li, Shuai Cheng;  Tan, Guangming;  Sun, Shiwei;  Hu, Zhiqiang;  Yang, Pengshuo;  Wang, Rui;  Liu, Yawen;  Chen, Feng;  Peng, Jianjun;  Peng, Hong;  Song, Hongxing;  Xia, Yang;  Chu, Liqun;  Zhou, Quan;  Guan, Feng;  Wu, Jing;  Bu, Dongbo;  Ning, Kang
收藏  |  浏览/下载：45/0  |  提交时间：2020/12/10
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning (vol 20, 537, 2019) 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 5
作者:  Zhang, Haicang;  Zhang, Qi;  Ju, Fusong;  Zhu, Jianwei;  Gao, Yujuan;  Xie, Ziwei;  Deng, Minghua;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：44/0  |  提交时间：2020/12/10
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 11
作者:  Zhang, Haicang;  Zhang, Qi;  Ju, Fusong;  Zhu, Jianwei;  Gao, Yujuan;  Xie, Ziwei;  Deng, Minghua;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：45/0  |  提交时间：2020/12/10
Residue-residue contacts prediction  Deep learning  Markov random fields  Composite likelihood maximization  
Best-first search guided multistage mass spectrometry-based glycan identification 期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 17, 页码: 2991-2997
作者:  Wang, Yaojun;  Bu, Dongbo;  Huang, Chuncui;  Wang, Hui;  Zhou, Jinyu;  Dong, Junchuan;  Pan, Weiyi;  Zhang, Jingwei;  Zhang, Qi;  Li, Yan;  Sun, Shiwei
收藏  |  浏览/下载：82/0  |  提交时间：2019/12/10
DIFFUSE: predicting isoform functions from sequences and expression profiles via deep learning 期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 14, 页码: I284-I294
作者:  Chen, Hao;  Shaw, Dipan;  Zeng, Jianyang;  Bu, Dongbo;  Jiang, Tao
收藏  |  浏览/下载：79/0  |  提交时间：2019/12/10
Constrained maximum weighted bipartite matching: a novel approach to radio broadcast scheduling 期刊论文
SCIENCE CHINA-INFORMATION SCIENCES, 2019, 卷号: 62, 期号: 7, 页码: 14
作者:  Wang, Shaojiang;  Wu, Tianyong;  Yao, Yuan;  Bu, Dongbo;  Cai, Shaowei
收藏  |  浏览/下载：85/0  |  提交时间：2019/08/16
radio broadcast scheduling  branch-and-bound algorithm  constrained maximum weighted bipartite matching  Kuhn-Munkres algorithm  strategy combinations  
Predicting human contacts through alternating direction method of multipliers 期刊论文
INTERNATIONAL JOURNAL OF MODERN PHYSICS C, 2019, 卷号: 30, 期号: 7, 页码: 18
作者:  Huang, Chunlin;  Bu, Dongbo
收藏  |  浏览/下载：71/0  |  提交时间：2019/12/10
Human contact prediction  alternating direction method of multipliers  periodicity  
De novo glycan structural identification from mass spectra using tree merging strategy 期刊论文
COMPUTATIONAL BIOLOGY AND CHEMISTRY, 2019, 卷号: 80, 页码: 217-224
作者:  Ju, Fusong;  Zhang, Jingwei;  Bu, Dongbo;  Li, Yan;  Zhou, Jinyu;  Wang, Hui;  Wang, Yaojun;  Huang, Chuncui;  Sun, Shiwei
收藏  |  浏览/下载：269/0  |  提交时间：2019/08/16
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 10
作者:  Wang, Chao;  Wei, Yi;  Zhang, Haicang;  Kong, Lupeng;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：80/0  |  提交时间：2019/08/16
Protein structure prediction  Energy function  Attraction-basin  Reverse Monte Carlo sampling  Monte Carlo search  Linear program