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Characterization of collision-induced dissociation of deprotonated peptides of 4-16 amino acids using high-resolution mass spectrometry 期刊论文
INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2019, 卷号: 445, 页码: 8
作者:  Zuo, Mei-Qing;  Sun, Rui-Xiang;  Fang, Run-Qian;  He, Si-Min;  Dong, Meng-Qiu
收藏  |  浏览/下载：258/0  |  提交时间：2019/12/10
Negative-ion mass spectrometry  Peptide fragmentation  Collision-induced dissociation (CID)  Higher-energy collisional dissociation (HCD)  Fragmentation efficiency  
Improving mass spectrometry analysis of protein structures with arginine-selective chemical cross-linkers 期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10, 页码: 11
作者:  Jones, Alexander X.;  Cao, Yong;  Tangi, Yu-Liang;  Wang, Jian-Hua;  Ding, Yue-He;  Tan, Hui;  Chen, Zhen-Lin;  Fang, Run-Qian;  Yin, Jili;  Chen, Rong-Chang;  Zhu, Xing;  She, Yang;  Huang, Niu;  Shao, Feng;  Ye, Keqiong;  Sun, Rui-Xiang;  He, Si-Min;  Lei, Xiaoguang;  Dong, Meng-Qiu
收藏  |  浏览/下载：91/0  |  提交时间：2019/12/10
A high-speed search engine pLink 2 with systematic evaluation for proteome-scale identification of cross-linked peptides 期刊论文
NATURE COMMUNICATIONS, 2019, 卷号: 10, 页码: 12
作者:  Chen, Zhen-Lin;  Meng, Jia-Ming;  Cao, Yong;  Yin, Ji-Li;  Fang, Run-Qian;  Fan, Sheng-Bo;  Liu, Chao;  Zeng, Wen-Feng;  Ding, Yue-He;  Tan, Dan;  Wu, Long;  Zhou, Wen-Jing;  Chi, Hao;  Sun, Rui-Xiang;  Dong, Meng-Qiu;  He, Si-Min
收藏  |  浏览/下载：91/0  |  提交时间：2019/12/10
Comprehensive identification of peptides in tandem mass spectra using an efficient open search engine 期刊论文
NATURE BIOTECHNOLOGY, 2018, 卷号: 36, 期号: 11, 页码: 1059-+
作者:  Chi, Hao;  Liu, Chao;  Yang, Hao;  Zeng, Wen-Feng;  Wu, Long;  Zhou, Wen-Jing;  Wang, Rui-Min;  Niu, Xiu-Nan;  Ding, Yue-He;  Zhang, Yao;  Wang, Zhao-Wei;  Chen, Zhen-Lin;  Sun, Rui-Xiang;  Liu, Tao;  Tan, Guang-Ming;  Dong, Meng-Qiu;  Xu, Ping;  Zhang, Pei-Heng;  He, Si-Min
收藏  |  浏览/下载：84/0  |  提交时间：2019/08/16
pGlyco 2.0 enables precision N-glycoproteomics with comprehensive quality control and one-step mass spectrometry for intact glycopeptide identification 期刊论文
NATURE COMMUNICATIONS, 2017, 卷号: 8, 页码: 14
作者:  Liu, Ming-Qi;  Zeng, Wen-Feng;  Fang, Pan;  Cao, Wei-Qian;  Liu, Chao;  Yan, Guo-Quan;  Zhang, Yang;  Peng, Chao;  Wu, Jian-Qiang;  Zhang, Xiao-Jin;  Tu, Hui-Jun;  Chi, Hao;  Sun, Rui-Xiang;  Cao, Yong;  Dong, Meng-Qiu;  Jiang, Bi-Yun;  Huang, Jiang-Ming;  Shen, Hua-Li;  Wong, Catherine C. L.;  He, Si-Min;  Yang, Peng-Yuan
收藏  |  浏览/下载：79/0  |  提交时间：2019/12/12
Open-pNovo: De Novo Peptide Sequencing with Thousands of Protein Modifications 期刊论文
JOURNAL OF PROTEOME RESEARCH, 2017, 卷号: 16, 期号: 2, 页码: 645-654
作者:  Yang, Hao;  Chi, Hao;  Zhou, Wen-Jing;  Zeng, Wen-Feng;  He, Kun;  Liu, Chao;  Sun, Rui-Xiang;  He, Si-Min
收藏  |  浏览/下载：50/0  |  提交时间：2019/12/12
tandem mass spectrometry  de novo peptide sequencing  dynamic programming  unexpected modifications  
pGlyco: a pipeline for the identification of intact N-glycopeptides by using HCD-and CID-MS/MS and MS3 期刊论文
SCIENTIFIC REPORTS, 2016, 卷号: 6, 页码: 10
作者:  Zeng, Wen-Feng;  Liu, Ming-Qi;  Zhang, Yang;  Wu, Jian-Qiang;  Fang, Pan;  Peng, Chao;  Nie, Aiying;  Yan, Guoquan;  Cao, Weiqian;  Liu, Chao;  Chi, Hao;  Sun, Rui-Xiang;  Wong, Catherine C. L.;  He, Si-Min;  Yang, Pengyuan
收藏  |  浏览/下载：70/0  |  提交时间：2019/12/13
pTop 1.0: A High-Accuracy and High-Efficiency Search Engine for Intact Protein Identification 期刊论文
ANALYTICAL CHEMISTRY, 2016, 卷号: 88, 期号: 6, 页码: 3082-3090
作者:  Sun, Rui-Xiang;  Luo, Lan;  Wu, Long;  Wang, Rui-Min;  Zeng, Wen-Feng;  Chi, Hao;  Liu, Chao;  He, Si-Min
收藏  |  浏览/下载：57/0  |  提交时间：2019/12/13
pFind-Alioth: A novel unrestricted database search algorithm to improve the interpretation of high-resolution MS/MS data (Reprinted from vol 125, pg 89-97, 2015) 期刊论文
JOURNAL OF PROTEOMICS, 2015, 卷号: 129, 页码: 33-41
作者:  Chi, Hao;  He, Kun;  Yang, Bing;  Chen, Zhen;  Sun, Rui-Xiang;  Fan, Sheng-Bo;  Zhang, Kun;  Liu, Chao;  Yuan, Zuo-Fei;  Wang, Quan-Hui;  Liu, Si-Qi;  Dong, Meng-Qiu;  He, Si-Min
收藏  |  浏览/下载：53/0  |  提交时间：2019/12/13
Unrestricted database search  Ion index  In-depth interpretation  High resolution MS/MS  
pFind-Alioth: A novel unrestricted database search algorithm to improve the interpretation of high-resolution MS/MS data 期刊论文
JOURNAL OF PROTEOMICS, 2015, 卷号: 125, 页码: 89-97
作者:  Chi, Hao;  He, Kun;  Yang, Bing;  Chen, Zhen;  Sun, Rui-Xiang;  Fan, Sheng-Bo;  Zhang, Kun;  Liu, Chao;  Yuan, Zuo-Fei;  Wang, Quan-Hui;  Liu, Si-Qi;  Dong, Meng-Qiu;  He, Si-Min
收藏  |  浏览/下载：60/0  |  提交时间：2019/12/13
Unrestricted database search  Ion index  In-depth interpretation  High resolution MS/MS