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GIPS-Mix for Accurate Identification of Isomeric Components in Glycan Mixtures Using Intelligent Group-Opting Strategy 期刊论文
ANALYTICAL CHEMISTRY, 2022, 页码: 9
作者:  Huang, Chuncui;  Hou, Meijie;  Yan, Jingyu;  Wang, Hui;  Wang, Yu;  Cao, Cuiyan;  Wang, Yaojun;  Gao, Huanyu;  Ma, Xinyue;  Zheng, Yi;  Bu, Dongbo;  Chai, Wengang;  Li, Yan;  Sun, Shiwei
收藏  |  浏览/下载：14/0  |  提交时间：2023/07/12
Microbiome Resilience and Health Implications for People in Half-Year Travel 期刊论文
FRONTIERS IN IMMUNOLOGY, 2022, 卷号: 13, 页码: 15
作者:  Cheng, Mingyue;  Liu, Hong;  Han, Maozhen;  Li, Shuai Cheng;  Bu, Dongbo;  Sun, Shiwei;  Hu, Zhiqiang;  Yang, Pengshuo;  Wang, Rui;  Liu, Yawen;  Chen, Feng;  Peng, Jianjun;  Peng, Hong;  Song, Hongxing;  Xia, Yang;  Chu, Liqun;  Zhou, Quan;  Guan, Feng;  Wu, Jing;  Tan, Guangming;  Ning, Kang
收藏  |  浏览/下载：23/0  |  提交时间：2022/12/07
travel  enterotype  microbiome  bi-directional plasticity  resilience  dietary shift  immunity  health  
Seq-SetNet: directly exploiting multiple sequence alignment for protein secondary structure prediction 期刊论文
BIOINFORMATICS, 2022, 卷号: 38, 期号: 4, 页码: 990-996
作者:  Ju, Fusong;  Zhu, Jianwei;  Zhang, Qi;  Wei, Guozheng;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：18/0  |  提交时间：2022/12/07
FALCON2: a web server for high-quality prediction of protein tertiary structures 期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: 1, 页码: 14
作者:  Kong, Lupeng;  Ju, Fusong;  Zhang, Haicang;  Sun, Shiwei;  Bu, Dongbo
收藏  |  浏览/下载：37/0  |  提交时间：2021/12/01
Protein structure prediction  Template-based modeling  Ab initio prediction  Protein structure prediction web service  
HepParser: An Intelligent Software Program for Deciphering Low-Molecular-Weight Heparin Based on Mass Spectrometry 期刊论文
FRONTIERS IN CHEMISTRY, 2021, 卷号: 9, 页码: 13
作者:  Wang, Hui;  Wang, Yu;  Hou, Meijie;  Zhang, Chunming;  Wang, Yaojun;  Guo, Zhendong;  Bu, Dongbo;  Li, Yan;  Huang, Chuncui;  Sun, Shiwei
收藏  |  浏览/下载：35/0  |  提交时间：2021/12/01
LMWHs  mass spectrometry  glycosaminoglycans  isotopic distribution  computational method  
CopulaNet: Learning residue co-evolution directly from multiple sequence alignment for protein structure prediction 期刊论文
NATURE COMMUNICATIONS, 2021, 卷号: 12, 期号: 1, 页码: 9
作者:  Ju, Fusong;  Zhu, Jianwei;  Shao, Bin;  Kong, Lupeng;  Liu, Tie-Yan;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：35/0  |  提交时间：2021/12/01
ISSEC: inferring contacts among protein secondary structure elements using deep object detection 期刊论文
BMC BIOINFORMATICS, 2020, 卷号: 21, 期号: 1, 页码: 13
作者:  Zhang, Qi;  Zhu, Jianwei;  Ju, Fusong;  Kong, Lupeng;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：29/0  |  提交时间：2021/12/01
Protein structure  Secondary structure elements  Inter-SSE contacts  
Identification of glycan branching patterns using multistage mass spectrometry with spectra tree analysis 期刊论文
JOURNAL OF PROTEOMICS, 2020, 卷号: 217, 页码: 7
作者:  Wang, Hui;  Zhang, Jingwei;  Dong, Junchuan;  Hou, Meijie;  Pan, Weiyi;  Bu, Dongbo;  Zhou, Jinyu;  Zhang, Qi;  Wang, Yaojun;  Zhao, Keli;  Li, Yan;  Huang, Chuncui;  Sun, Shiwei
收藏  |  浏览/下载：58/0  |  提交时间：2020/12/10
Multi-stage mass spectrometry  Glycan branching pattern  Glycan identification  Spectra tree  Isomeric glycan  
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 11
作者:  Zhang, Haicang;  Zhang, Qi;  Ju, Fusong;  Zhu, Jianwei;  Gao, Yujuan;  Xie, Ziwei;  Deng, Minghua;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：46/0  |  提交时间：2020/12/10
Residue-residue contacts prediction  Deep learning  Markov random fields  Composite likelihood maximization  
Best-first search guided multistage mass spectrometry-based glycan identification 期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 17, 页码: 2991-2997
作者:  Wang, Yaojun;  Bu, Dongbo;  Huang, Chuncui;  Wang, Hui;  Zhou, Jinyu;  Dong, Junchuan;  Pan, Weiyi;  Zhang, Jingwei;  Zhang, Qi;  Li, Yan;  Sun, Shiwei
收藏  |  浏览/下载：83/0  |  提交时间：2019/12/10