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Prediction and analysis of multiple protein lysine modified sites based on conditional wasserstein generative adversarial networks 期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: 1, 页码: 17
作者:  Yang, Yingxi;  Wang, Hui;  Li, Wen;  Wang, Xiaobo;  Wei, Shizhao;  Liu, Yulong;  Xu, Yan
收藏  |  浏览/下载:37/0  |  提交时间:2021/12/01
Post-translational modification  Deep learning  Generative adversarial networks  Random forest  
Spark-based parallel calculation of 3D fourier shell correlation for macromolecule structure local resolution estimation 期刊论文
BMC BIOINFORMATICS, 2020, 卷号: 21, 页码: 18
作者:  Lue, Yongchun;  Zeng, Xiangrui;  Tian, Xinhui;  Shi, Xiao;  Wang, Hui;  Zheng, Xiaohui;  Liu, Xiaodong;  Zhao, Xiaofang;  Gao, Xin;  Xu, Min
收藏  |  浏览/下载:52/0  |  提交时间:2020/12/10
3D local Fourier shell correlation  3D local resolution map  Key-value data  Spark  3D array partition  
Fine-grained alignment of cryo-electron subtomograms based on MPI parallel optimization 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 13
作者:  Lu, Yongchun;  Zeng, Xiangrui;  Zhao, Xiaofang;  Li, Shirui;  Li, Hua;  Gao, Xin;  Xu, Min
收藏  |  浏览/下载:76/0  |  提交时间:2019/12/10
Stochastic average gradient  Fine-grained alignment  Cryo-ET  MPI  
DeepUbi: a deep learning framework for prediction of ubiquitination sites in proteins 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 10
作者:  Fu, Hongli;  Yang, Yingxi;  Wang, Xiaobo;  Wang, Hui;  Xu, Yan
收藏  |  浏览/下载:108/0  |  提交时间:2019/04/03
Ubiquitination  Deep learning  Convolutional neural networks  
A deep learning method to more accurately recall known lysine acetylation sites 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 11
作者:  Wu, Meiqi;  Yang, Yingxi;  Wang, Hui;  Xu, Yan
收藏  |  浏览/下载:75/0  |  提交时间:2019/04/03
Lysine acetylation  PTMs  Deep learning