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Multi-labelled proteins recognition for high-throughput microscopy images using deep convolutional neural networks 期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: SUPPL 3, 页码: 14
作者:  Zhang, Enze;  Zhang, Boheng;  Hu, Shaohan;  Zhang, Fa;  Liu, Zhiyong;  Wan, Xiaohua
收藏  |  浏览/下载：47/0  |  提交时间：2021/12/01
Protein pattern recognition  DNNs  Multi-class and multi-label  Label imbalance  High-throughput microscopy images  
Compressed sensing improved iterative reconstruction-reprojection algorithm for electron tomography 期刊论文
BMC BIOINFORMATICS, 2020, 卷号: 21, 页码: 19
作者:  Li, Lun;  Han, Renmin;  Zhang, Zhaotian;  Guo, Tiande;  Liu, Zhiyong;  Zhang, Fa
收藏  |  浏览/下载：35/0  |  提交时间：2021/12/01
Electron tomography  Compressed sensing  Matching pursuit  Iterative reconstruction-reprojection  
Live-SIMBA: an ImageJ plug-in for the universal and accelerated single molecule-guided Bayesian localization super resolution microscopy (SIMBA) method 期刊论文
BIOMEDICAL OPTICS EXPRESS, 2020, 卷号: 11, 期号: 10, 页码: 5842-5859
作者:  Li, Hongjia;  Xu, Fan;  Gao, Shan;  Zhang, Mingshu;  Xue, Fudong;  Xu, Pingyong;  Zhang, Fa
收藏  |  浏览/下载：61/0  |  提交时间：2020/12/10
A Parallel Cerebrovascular Segmentation Algorithm Based on Focused Multi-Gaussians Model and Heterogeneous Markov Random Field 期刊论文
IEEE TRANSACTIONS ON NANOBIOSCIENCE, 2020, 卷号: 19, 期号: 3, 页码: 538-546
作者:  Lv, Zhilong;  Mi, Fubo;  Wu, Zhongke;  Zhu, Yicheng;  Liu, Xinyu;  Tian, Mei;  Zhang, Fa;  Wang, Xingce;  Wan, Xiaohua
收藏  |  浏览/下载：64/0  |  提交时间：2020/12/10
Gaussian distribution  Image segmentation  Particle swarm optimization  Optimization  Histograms  Markov random fields  Robustness  Three-dimensional cerebrovascular segmentation  focused multi-Gaussians model  Chaotic oscillation particle swarm optimization  Markov random field  
Super-resolution nanoscopy by coherent control on nanoparticle emission 期刊论文
SCIENCE ADVANCES, 2020, 卷号: 6, 期号: 16, 页码: 8
作者:  Liu, Congyue;  Liu, Wei;  Wang, Shufeng;  Li, Hongjia;  Lv, Zhilong;  Zhang, Fa;  Zhang, Donghui;  Teng, Junlin;  Zheng, Tao;  Li, Donghai;  Zhang, Mingshu;  Xu, Pingyong;  Gong, Qihuang
收藏  |  浏览/下载：65/0  |  提交时间：2020/12/10
Breast cancer histopathological image classification using a hybrid deep neural network 期刊论文
METHODS, 2020, 卷号: 173, 页码: 52-60
作者:  Yan, Rui;  Ren, Fei;  Wang, Zihao;  Wang, Lihua;  Zhang, Tong;  Liu, Yudong;  Rao, Xiaosong;  Zheng, Chunhou;  Zhang, Fa
收藏  |  浏览/下载：55/0  |  提交时间：2020/12/10
Breast cancer  Histopathological images  Image classification  Deep neural network  Dataset  
Research progress of computer aided diagnosis system for pulmonary nodules in CT images 期刊论文
JOURNAL OF X-RAY SCIENCE AND TECHNOLOGY, 2020, 卷号: 28, 期号: 1, 页码: 1-16
作者:  Wang, Yu;  Wu, Bo;  Zhang, Nan;  Liu, Jiabao;  Ren, Fei;  Zhao, Liqin
收藏  |  浏览/下载：62/0  |  提交时间：2020/12/10
Pulmonary nodules  computer-aided detection (CADe)  computer-aided diagnosis (CADx)  multi-task CAD  
A Consensus Framework of Distributed Multiple-Tilt Reconstruction in Electron Tomography 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2019, 页码: 11
作者:  Wang, Zihao;  Zhang, Jingrong;  Gao, Weifang;  Liu, Zhiyong;  Wan, Xiaohua;  Zhang, Fa
收藏  |  浏览/下载：51/0  |  提交时间：2020/12/10
consensus optimization  cryoelectron tomography  multiple-tilt reconstruction  parallel computing  TxBR  
AuTom-dualx: a toolkit for fully automatic fiducial marker-based alignment of dual-axis tilt series with simultaneous reconstruction 期刊论文
BIOINFORMATICS, 2019, 卷号: 35, 期号: 2, 页码: 319-328
作者:  Han, Renmin;  Wan, Xiaohua;  Li, Lun;  Lawrence, Albert;  Yang, Peng;  Li, Yu;  Wang, Sheng;  Sun, Fei;  Liu, Zhiyong;  Gao, Xin;  Zhang, Fa
收藏  |  浏览/下载：81/0  |  提交时间：2019/04/03
AutoGDeterm: Automatic Geometry Determination for Electron Tomography 期刊论文
TSINGHUA SCIENCE AND TECHNOLOGY, 2018, 卷号: 23, 期号: 4, 页码: 369-376
作者:  Chen, Yu;  Wang, Zihao;  Li, Lun;  Zhang, Jingrong;  Wan, Xiaohua;  Sun, Fei;  Zhang, Fa
收藏  |  浏览/下载：79/0  |  提交时间：2019/12/10
electron tomography  geometry determination  human intervention  full automation  AutoGDeterm  comparable accuracy