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GeneCompass: deciphering universal gene regulatory mechanisms with a knowledge-informed cross-species foundation model 期刊论文
CELL RESEARCH, 2024, 页码: 16
作者:  Yang, Xiaodong;  Liu, Guole;  Feng, Guihai;  Bu, Dechao;  Wang, Pengfei;  Jiang, Jie;  Chen, Shubai;  Yang, Qinmeng;  Miao, Hefan;  Zhang, Yiyang;  Man, Zhenpeng;  Liang, Zhongming;  Wang, Zichen;  Li, Yaning;  Li, Zheng;  Liu, Yana;  Tian, Yao;  Liu, Wenhao;  Li, Cong;  Li, Ao;  Dong, Jingxi;  Hu, Zhilong;  Fang, Chen;  Cui, Lina;  Deng, Zixu;  Jiang, Haiping;  Cui, Wentao;  Zhang, Jiahao;  Yang, Zhaohui;  Li, Handong;  He, Xingjian;  Zhong, Liqun;  Zhou, Jiaheng;  Wang, Zijian;  Long, Qingqing;  Xu, Ping;  Wang, Hongmei;  Meng, Zhen;  Wang, Xuezhi;  Wang, Yangang;  Wang, Yong;  Zhang, Shihua;  Guo, Jingtao;  Zhao, Yi;  Zhou, Yuanchun;  Li, Fei;  Liu, Jing;  Chen, Yiqiang;  Yang, Ge;  Li, Xin
收藏  |  浏览/下载：4/0  |  提交时间：2024/12/06
Fault-tolerant quantum chemical calculations with improved machine-learning models 期刊论文
JOURNAL OF COMPUTATIONAL CHEMISTRY, 2024, 页码: 19
作者:  Yuan, Kai;  Zhou, Shuai;  Li, Ning;  Li, Tianyan;  Ding, Bowen;  Guo, Danhuai;  Ma, Yingjin
收藏  |  浏览/下载：1/0  |  提交时间：2024/12/06
coded computing  exciton model  fragmented approach  interacting energy  load-balancing  
New Distinguishers for Negation-Limited Weak Pseudorandom Functions 期刊论文
THEORY OF COMPUTING, 2024, 卷号: 20, 页码: 19
作者:  Chen, Zhihuai;  Guo, Siyao;  Li, Qian;  Lin, Chengyu;  Sun, Xiaoming
收藏  |  浏览/下载：1/0  |  提交时间：2024/12/06
pseudorandom functions  negation-limited circuits  Fourier analysis  
Wearable device-measured moderate to vigorous physical activity and risk of degenerative aortic valve stenosis 期刊论文
EUROPEAN HEART JOURNAL, 2024, 页码: 16
作者:  Li, Ziang;  Cheng, Sijing;  Guo, Bo;  Ding, Lu;  Liang, Yu;  Shen, Yinghan;  Li, Jinyue;  Hu, Yiqing;  Long, Tianxin;  Guo, Xinli;  Ge, Junbo;  Gao, Runlin;  Pibarot, Philippe;  Zhang, Bin;  Xu, Haiyan;  Clavel, Marie-Annick;  Wu, Yongjian
收藏  |  浏览/下载：3/0  |  提交时间：2024/12/06
Exercise  Aortic stenosis  Aortic regurgitation  Mitral regurgitation  Aortic valve replacement  
FastTuning: Enabling Fast and Efficient Hyper-Parameter Tuning With Partitioning and Parallelism of Search Space 期刊论文
IEEE TRANSACTIONS ON PARALLEL AND DISTRIBUTED SYSTEMS, 2024, 卷号: 35, 期号: 7, 页码: 1174-1188
作者:  Li, Xiaqing;  Guo, Qi;  Zhang, Guangyan;  Ye, Siwei;  He, Guanhua;  Yao, Yiheng;  Zhang, Rui;  Hao, Yifan;  Du, Zidong;  Zheng, Weimin
收藏  |  浏览/下载：7/0  |  提交时间：2024/12/06
Deep learning  distributed hyper-parameter tuning (HPT) system  parallel computing  
Tyche: An Efficient and General Prefetcher for Indirect Memory Accesses 期刊论文
ACM TRANSACTIONS ON ARCHITECTURE AND CODE OPTIMIZATION, 2024, 卷号: 21, 期号: 2, 页码: 26
作者:  Xue, Feng;  Han, Chenji;  Li, Xinyu;  Wu, Junliang;  Zhang, Tingting;  Liu, Tianyi;  Hao, Yifan;  Du, Zidong;  Guo, Qi;  Zhang, Fuxin
收藏  |  浏览/下载：2/0  |  提交时间：2024/12/06
Data prefetching  hardware prefetching  indirect memory accesses  microarchitecture  
PPRTGI: A Personalized PageRank Graph Neural Network for TF-Target Gene Interaction Detection 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2024, 卷号: 21, 期号: 3, 页码: 480-491
作者:  Ma, Ke;  Li, Jiawei;  Zhao, Mengyuan;  Zamit, Ibrahim;  Lin, Bin;  Guo, Fei;  Tang, Jijun
收藏  |  浏览/下载：1/0  |  提交时间：2024/12/06
DNA  Proteins  Organisms  Biology  Proteomics  Gene expression  Feature extraction  Transcription factor  TF-target gene interactions  DNA sequence  graph neural network  personalized PageRank  
Regulation of interstitial fluid flow in adventitia along vasculature by heartbeat and respiration 期刊论文
ISCIENCE, 2024, 卷号: 27, 期号: 4, 页码: 22
作者:  Li, Hongyi;  Li, Bei;  Luo, Wenqi;  Qi, Xi;  Hao, You;  Yang, Chaozhi;  Li, Wenqing;  Li, Jiazheng;  Hua, Zhen;  Guo, Tan;  Zheng, Zhijian;  Yu, Xue;  Liu, Lei;  Zhao, Jianping;  Li, Tiantian;  Huang, Dahai;  Hu, Jun;  Li, Zongmin;  Wang, Fang;  Li, Hua;  Ma, Chao;  Ji, Fusui
收藏  |  浏览/下载：3/0  |  提交时间：2024/12/06
A new paradigm for applying deep learning to protein-ligand interaction prediction 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2024, 卷号: 25, 期号: 3, 页码: 12
作者:  Wang, Zechen;  Wang, Sheng;  Li, Yangyang;  Guo, Jingjing;  Wei, Yanjie;  Mu, Yuguang;  Zheng, Liangzhen;  Li, Weifeng
收藏  |  浏览/下载：2/0  |  提交时间：2024/12/06
protein-ligand interaction  scoring function  deep learning  graph neural network  
Optical Genome Mapping Reveals the Landscape of Structural Variations and Their Clinical Significance in HBOC-Related Breast Cancer 期刊论文
FRONTIERS IN BIOSCIENCE-LANDMARK, 2024, 卷号: 29, 期号: 1, 页码: 1-15
作者:  Cheng, Yanan;  Dong, Li;  Bu, Dechao;  Han, Lei;  Zhao, Yi;  Liu, Juntian;  Guo, Xiaojing;  Xu, Hanli;  Yu, Jinpu
收藏  |  浏览/下载：14/0  |  提交时间：2024/05/20
HBOC  breast cancer  optical genome mapping  structural variation  BRCA1/2  chromothripsis