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中国科学院计算技术研究所机构知识库
Institute of Computing Technology, Chinese Academy IR
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浏览/检索结果:
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DeepFusion: A deep bimodal information fusion network for unraveling protein-RNA interactions using in vivo RNA structures
期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2024, 卷号: 23, 页码: 617-625
作者:
Qiao, Yixuan
;
Yang, Rui
;
Liu, Yang
;
Chen, Jiaxin
;
Zhao, Lianhe
;
Huo, Peipei
;
Wang, Zhihao
;
Bu, Dechao
;
Wu, Yang
;
Zhao, Yi
收藏
  |  
浏览/下载:16/0
  |  
提交时间:2024/05/20
Information fusion
Deep learning
RNA -binding proteins
In vivo RNA structures
Motifs
GeneCompass: deciphering universal gene regulatory mechanisms with a knowledge-informed cross-species foundation model
期刊论文
CELL RESEARCH, 2024, 页码: 16
作者:
Yang, Xiaodong
;
Liu, Guole
;
Feng, Guihai
;
Bu, Dechao
;
Wang, Pengfei
;
Jiang, Jie
;
Chen, Shubai
;
Yang, Qinmeng
;
Miao, Hefan
;
Zhang, Yiyang
;
Man, Zhenpeng
;
Liang, Zhongming
;
Wang, Zichen
;
Li, Yaning
;
Li, Zheng
;
Liu, Yana
;
Tian, Yao
;
Liu, Wenhao
;
Li, Cong
;
Li, Ao
;
Dong, Jingxi
;
Hu, Zhilong
;
Fang, Chen
;
Cui, Lina
;
Deng, Zixu
;
Jiang, Haiping
;
Cui, Wentao
;
Zhang, Jiahao
;
Yang, Zhaohui
;
Li, Handong
;
He, Xingjian
;
Zhong, Liqun
;
Zhou, Jiaheng
;
Wang, Zijian
;
Long, Qingqing
;
Xu, Ping
;
Wang, Hongmei
;
Meng, Zhen
;
Wang, Xuezhi
;
Wang, Yangang
;
Wang, Yong
;
Zhang, Shihua
;
Guo, Jingtao
;
Zhao, Yi
;
Zhou, Yuanchun
;
Li, Fei
;
Liu, Jing
;
Chen, Yiqiang
;
Yang, Ge
;
Li, Xin
收藏
  |  
浏览/下载:4/0
  |  
提交时间:2024/12/06
Optical Genome Mapping Reveals the Landscape of Structural Variations and Their Clinical Significance in HBOC-Related Breast Cancer
期刊论文
FRONTIERS IN BIOSCIENCE-LANDMARK, 2024, 卷号: 29, 期号: 1, 页码: 1-15
作者:
Cheng, Yanan
;
Dong, Li
;
Bu, Dechao
;
Han, Lei
;
Zhao, Yi
;
Liu, Juntian
;
Guo, Xiaojing
;
Xu, Hanli
;
Yu, Jinpu
收藏
  |  
浏览/下载:14/0
  |  
提交时间:2024/05/20
HBOC
breast cancer
optical genome mapping
structural variation
BRCA1/2
chromothripsis
Genomic and transcriptomic profiling indicates the prognosis significance of mutational signature for TMB-high subtype in Chinese patients with gastric cancer
期刊论文
JOURNAL OF ADVANCED RESEARCH, 2023, 卷号: 51, 页码: 121-134
作者:
Cheng, Yanan
;
Bu, Dechao
;
Zhang, Qiaoling
;
Sun, Rebecca
;
Lyle, Stephen
;
Zhao, Gang
;
Dong, Li
;
Li, Hui
;
Zhao, Yi
;
Yu, Jinpu
;
Hao, Xishan
收藏
  |  
浏览/下载:17/0
  |  
提交时间:2023/12/04
Gastric cancer
Comprehensive genomic profiling
TMB
Mutational signature
Tumor metabolism
What makes a successful rebuttal in computer science conferences?: A perspective on social interaction
期刊论文
JOURNAL OF INFORMETRICS, 2023, 卷号: 17, 期号: 3, 页码: 14
作者:
Huang, Junjie
;
Huang, Win-bin
;
Bu, Yi
;
Cao, Qi
;
Shen, Huawei
;
Cheng, Xueqi
收藏
  |  
浏览/下载:16/0
  |  
提交时间:2023/12/04
Peer review
Rebuttal analysis
Social network analysis
Social interaction
Rebuttal strategy
Rebuttal success prediction
Biological knowledge graph-guided investigation of immune therapy response in cancer with graph neural network
期刊论文
BRIEFINGS IN BIOINFORMATICS, 2023, 卷号: 24, 期号: 2, 页码: 9
作者:
Zhao, Lianhe
;
Qi, Xiaoning
;
Chen, Yang
;
Qiao, Yixuan
;
Bu, Dechao
;
Wu, Yang
;
Luo, Yufan
;
Wang, Sheng
;
Zhang, Rui
;
Zhao, Yi
收藏
  |  
浏览/下载:18/0
  |  
提交时间:2023/12/04
immune checkpoints inhibitors
deep learning
graph neural networks
GIPS-Mix for Accurate Identification of Isomeric Components in Glycan Mixtures Using Intelligent Group-Opting Strategy
期刊论文
ANALYTICAL CHEMISTRY, 2022, 页码: 9
作者:
Huang, Chuncui
;
Hou, Meijie
;
Yan, Jingyu
;
Wang, Hui
;
Wang, Yu
;
Cao, Cuiyan
;
Wang, Yaojun
;
Gao, Huanyu
;
Ma, Xinyue
;
Zheng, Yi
;
Bu, Dongbo
;
Chai, Wengang
;
Li, Yan
;
Sun, Shiwei
收藏
  |  
浏览/下载:23/0
  |  
提交时间:2023/07/12
Filling gaps of genome scaffolds via probabilistic searching optical maps against assembly graph
期刊论文
BMC Bioinformatics, 2021, 卷号: 22, 期号: 1
作者:
Huang,Bin
;
Wei,Guozheng
;
Wang,Bing
;
Ju,Fusong
;
Zhong,Yi
;
Shi,Zhuozheng
;
Sun,Shiwei
;
Bu,Dongbo
收藏
  |  
浏览/下载:50/0
  |  
提交时间:2021/12/01
Genome assembly
Gap filling
Scaffolding
Optical maps
Probabilistic search
High Throughput Transcriptome Data Analysis and Computational Verification Reveal Immunotherapy Biomarkers of Compound Kushen Injection for Treating Triple-Negative Breast Cancer
期刊论文
FRONTIERS IN ONCOLOGY, 2021, 卷号: 11, 页码: 23
作者:
Liu, Xinkui
;
Wu, Yang
;
Zhang, Yingying
;
Bu, Dechao
;
Wu, Chao
;
Lu, Shan
;
Huang, Zhihong
;
Song, Yurong
;
Zhao, Yi
;
Guo, Fengying
;
Ye, Peizhi
;
Fu, Changgeng
;
Shen, Liangliang
;
Zhang, Jingyuan
;
Wang, Haojia
;
Duan, Xianchun
;
Wu, Jiarui
收藏
  |  
浏览/下载:37/0
  |  
提交时间:2022/06/21
compound kushen injection
triple-negative breast cancer
RNA sequencing
tumor microenvironment
prognostic signature
ncFANs v2.0: an integrative platform for functional annotation of non-coding RNAs
期刊论文
NUCLEIC ACIDS RESEARCH, 2021, 卷号: 49, 期号: W1, 页码: W459-W468
作者:
Zhang, Yuwei
;
Bu, Dechao
;
Huo, Peipei
;
Wang, Zhihao
;
Rong, Hao
;
Li, Yanguo
;
Liu, Jingjia
;
Ye, Meng
;
Wu, Yang
;
Jiang, Zheng
;
Liao, Qi
;
Zhao, Yi
收藏
  |  
浏览/下载:46/0
  |  
提交时间:2021/12/01