中文版 | English

在结果中检索

CSpace

浏览/检索结果: 共10条，第1-10条 帮助

限定条件        
已选(0)清除 条数/页：   排序方式：
SASA-Net: A Spatial-Aware Self-Attention Mechanism for Building Protein 3D Structure Directly From Inter- Residue Distances 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2023, 卷号: 20, 期号: 6, 页码: 3482-3488
作者:  Gong, Tiansu;  Ju, Fusong;  Sun, Shiwei;  Bu, Dongbo
收藏  |  浏览/下载：6/0  |  提交时间：2024/05/20
Deep learning  protein structure prediction  
Protein Structure Prediction: Challenges, Advances, and the Shift of Research Paradigms 期刊论文
GENOMICS PROTEOMICS & BIOINFORMATICS, 2023, 卷号: 21, 期号: 5, 页码: 913-925
作者:  Huang, Bin;  Kong, Lupeng;  Wang, Chao;  Ju, Fusong;  Zhang, Qi;  Zhu, Jianwei;  Gong, Tiansu;  Zhang, Haicang;  Yu, Chungong;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：2/0  |  提交时间：2024/05/20
Protein folding  Protein structure prediction  Deep learning  Transformer  Language model  
ProALIGN: Directly Learning Alignments for Protein Structure Prediction via Exploiting Context-Specific Alignment Motifs 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2022, 页码: 14
作者:  Kong, Lupeng;  Ju, Fusong;  Zheng, Wei-mou;  Zhu, Jianwei;  Sun, Shiwei;  Xu, Jinbo;  Bu, Dongbo
收藏  |  浏览/下载：18/0  |  提交时间：2022/12/07
deep learning and protein threading  protein alignment  protein structure prediction  
FALCON2: a web server for high-quality prediction of protein tertiary structures 期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: 1, 页码: 14
作者:  Kong, Lupeng;  Ju, Fusong;  Zhang, Haicang;  Sun, Shiwei;  Bu, Dongbo
收藏  |  浏览/下载：37/0  |  提交时间：2021/12/01
Protein structure prediction  Template-based modeling  Ab initio prediction  Protein structure prediction web service  
Predicting protein inter-residue contacts using composite likelihood maximization and deep learning 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 11
作者:  Zhang, Haicang;  Zhang, Qi;  Ju, Fusong;  Zhu, Jianwei;  Gao, Yujuan;  Xie, Ziwei;  Deng, Minghua;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：46/0  |  提交时间：2020/12/10
Residue-residue contacts prediction  Deep learning  Markov random fields  Composite likelihood maximization  
Predicting human contacts through alternating direction method of multipliers 期刊论文
INTERNATIONAL JOURNAL OF MODERN PHYSICS C, 2019, 卷号: 30, 期号: 7, 页码: 18
作者:  Huang, Chunlin;  Bu, Dongbo
收藏  |  浏览/下载：71/0  |  提交时间：2019/12/10
Human contact prediction  alternating direction method of multipliers  periodicity  
Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 10
作者:  Wang, Chao;  Wei, Yi;  Zhang, Haicang;  Kong, Lupeng;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：80/0  |  提交时间：2019/08/16
Protein structure prediction  Energy function  Attraction-basin  Reverse Monte Carlo sampling  Monte Carlo search  Linear program  
TagDict: Prediction of Theoretical Spectra of Peptides Based on A Tag Dictionary 期刊论文
CURRENT BIOINFORMATICS, 2018, 卷号: 13, 期号: 5, 页码: 444-449
作者:  Wang, Yaojun;  Zhang, Jingwei;  Bu, Dongbo;  Sun, Shiwei
收藏  |  浏览/下载：66/0  |  提交时间：2019/12/10
Mass spectrometry  theoretical spectrum prediction  database search  peptide identification  TagDict  MassAnalyzer  
Improving residue-residue contact prediction via low-rank and sparse decomposition of residue correlation matrix 期刊论文
BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2016, 卷号: 472, 期号: 1, 页码: 217-222
作者:  Zhang, Haicang;  Gao, Yujuan;  Deng, Minghua;  Wang, Chao;  Zhu, Jianwei;  Li, Shuai Cheng;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载：61/0  |  提交时间：2019/12/13
Protein contacts prediction  Correlation analysis  Background correlation removal  Low-rank and sparse matrix decomposition  
Fragment-HMM: A new approach to protein structure prediction 期刊论文
PROTEIN SCIENCE, 2008, 卷号: 17, 期号: 11, 页码: 1925-1934
作者:  Li, Shuai Cheng;  Bu, Dongbo;  Xu, Jinbo;  Li, Ming
收藏  |  浏览/下载：42/0  |  提交时间：2019/12/16
protein structure prediction  hidden Markov model  fragment assembly