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Validation Methods of Peptide Identification Results in Proteomics* 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125
作者:  Zhou Wen-Jing;  Zeng Wen-Feng;  Chi Hao;  He Si-Min
收藏  |  浏览/下载：8/0  |  提交时间：2023/12/04
proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods  
Validation Methods of Peptide Identification Results in Proteomics br 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125
作者:  Zhou, Wen-Jing;  Zeng, Wen-Feng;  Chi, Hao;  He, Si-Min
收藏  |  浏览/下载：23/0  |  提交时间：2023/12/04
proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods  
Deep images enhancement for turbid underwater images based on unsupervised learning 期刊论文
COMPUTERS AND ELECTRONICS IN AGRICULTURE, 2022, 卷号: 202, 页码: 10
作者:  Zhou, Wen-Hui;  Zhu, Deng-Ming;  Shi, Min;  Li, Zhao-Xin;  Duan, Ming;  Wang, Zhao-Qi;  Zhao, Guo-Liang;  Zheng, Cheng-Dong
收藏  |  浏览/下载：13/0  |  提交时间：2023/07/12
Image enhancement  Visual perception  Underwater dataset  Deep learning  
Accelerating Data Transfer in Dataflow Architectures Through a Look-Ahead Acknowledgment Mechanism 期刊论文
JOURNAL OF COMPUTER SCIENCE AND TECHNOLOGY, 2022, 卷号: 37, 期号: 4, 页码: 942-959
作者:  Feng, Yu-Jing;  Li, De-Jian;  Tan, Xu;  Ye, Xiao-Chun;  Fan, Dong-Rui;  Li, Wen-Ming;  Wang, Da;  Zhang, Hao;  Tang, Zhi-Min
收藏  |  浏览/下载：25/0  |  提交时间：2022/12/07
dataflow model  control-ow model  high-performance computing application  data transfer  power efficiency  
Breast Cancer Molecular Subtype Prediction on Pathological Images with Discriminative Patch Selection and Multi-Instance Learning 期刊论文
FRONTIERS IN ONCOLOGY, 2022, 卷号: 12, 页码: 11
作者:  Liu, Hong;  Xu, Wen-Dong;  Shang, Zi-Hao;  Wang, Xiang-Dong;  Zhou, Hai-Yan;  Ma, Ke-Wen;  Zhou, Huan;  Qi, Jia-Lin;  Jiang, Jia-Rui;  Tan, Li-Lan;  Zeng, Hui-Min;  Cai, Hui-Juan;  Wang, Kuan-Song;  Qian, Yue-Liang
收藏  |  浏览/下载：24/0  |  提交时间：2022/12/07
pathological image  weakly supervised learning  molecular subtype  breast cancer  H&E  
pValid 2: A deep learning based validation method for peptide identification in shotgun proteomics with increased discriminating power 期刊论文
JOURNAL OF PROTEOMICS, 2022, 卷号: 251, 页码: 9
作者:  Zhou, Wen-Jing;  Wei, Zhuo-Hong;  He, Si-Min;  Chi, Hao
收藏  |  浏览/下载：31/0  |  提交时间：2022/06/21
Proteomics  Tandem mass spectrometry  Retention time  Validation method  Deep learning  
COVID19db: a comprehensive database platform to discover potential drugs and targets of COVID-19 at whole transcriptomic scale 期刊论文
NUCLEIC ACIDS RESEARCH, 2022, 卷号: 50, 期号: D1, 页码: D747-D757
作者:  Zhang, Wenliang;  Zhang, Yan;  Min, Zhuochao;  Mo, Jing;  Ju, Zhen;  Guan, Wen;  Zeng, Binghui;  Liu, Yang;  Chen, Jianliang;  Zhang, Qianshen;  Li, Hanguang;  Zeng, Chunxia;  Wei, Yanjie;  Chan, Godfrey Chi-Fung
收藏  |  浏览/下载：19/0  |  提交时间：2022/12/07
circMine: a comprehensive database to integrate, analyze and visualize human disease-related circRNA transcriptome 期刊论文
NUCLEIC ACIDS RESEARCH, 2022, 卷号: 50, 期号: D1, 页码: D83-D92
作者:  Zhang, Wenliang;  Liu, Yang;  Min, Zhuochao;  Liang, Guodong;  Mo, Jing;  Ju, Zhen;  Zeng, Binghui;  Guan, Wen;  Zhang, Yan;  Chen, Jianliang;  Zhang, Qianshen;  Li, Hanguang;  Zeng, Chunxia;  Wei, Yanjie;  Chan, Godfrey Chi-Fung
收藏  |  浏览/下载：18/0  |  提交时间：2022/12/07
Precise, fast and comprehensive analysis of intact glycopeptides and modified glycans with pGlyco3 期刊论文
NATURE METHODS, 2021, 页码: 15
作者:  Zeng, Wen-Feng;  Cao, Wei-Qian;  Liu, Ming-Qi;  He, Si-Min;  Yang, Peng-Yuan
收藏  |  浏览/下载：29/0  |  提交时间：2022/06/21
pDeepXL: MS/MS Spectrum Prediction for Cross-Linked Peptide Pairs by Deep Learning 期刊论文
JOURNAL OF PROTEOME RESEARCH, 2021, 卷号: 20, 期号: 5, 页码: 2570-2582
作者:  Chen, Zhen-Lin;  Mao, Peng-Zhi;  Zeng, Wen-Feng;  Chi, Hao;  He, Si-Min
收藏  |  浏览/下载：39/0  |  提交时间：2021/12/01
cross-linking mass spectrometry  spectrum prediction  deep learning  transfer learning  online fine-tuning