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Prediction and analysis of multiple protein lysine modified sites based on conditional wasserstein generative adversarial networks 期刊论文
BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: 1, 页码: 17
作者:  Yang, Yingxi;  Wang, Hui;  Li, Wen;  Wang, Xiaobo;  Wei, Shizhao;  Liu, Yulong;  Xu, Yan
收藏  |  浏览/下载:37/0  |  提交时间:2021/12/01
Post-translational modification  Deep learning  Generative adversarial networks  Random forest  
Spark-based parallel calculation of 3D fourier shell correlation for macromolecule structure local resolution estimation 期刊论文
BMC BIOINFORMATICS, 2020, 卷号: 21, 页码: 18
作者:  Lue, Yongchun;  Zeng, Xiangrui;  Tian, Xinhui;  Shi, Xiao;  Wang, Hui;  Zheng, Xiaohui;  Liu, Xiaodong;  Zhao, Xiaofang;  Gao, Xin;  Xu, Min
收藏  |  浏览/下载:52/0  |  提交时间:2020/12/10
3D local Fourier shell correlation  3D local resolution map  Key-value data  Spark  3D array partition  
NF-kappa B-driven miR-34a impairs Treg/Th17 balance via targeting Foxp3 期刊论文
JOURNAL OF AUTOIMMUNITY, 2019, 卷号: 102, 页码: 96-113
作者:  Xie, Mengxiao;  Wang, Jingzhe;  Gong, Wen;  Xu, Huiling;  Pan, Xiaoyuan;  Chen, Yunpeng;  Ru, Songwei;  Wang, Hui;  Chen, Xiaodan;  Zhao, Yi;  Li, Jing;  Yin, Qing;  Xia, Sheng;  Zhou, Xiaoming;  Liu, Xia;  Shao, Qixiang
收藏  |  浏览/下载:71/0  |  提交时间:2019/12/10
DeepUbi: a deep learning framework for prediction of ubiquitination sites in proteins 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 10
作者:  Fu, Hongli;  Yang, Yingxi;  Wang, Xiaobo;  Wang, Hui;  Xu, Yan
收藏  |  浏览/下载:108/0  |  提交时间:2019/04/03
Ubiquitination  Deep learning  Convolutional neural networks  
A deep learning method to more accurately recall known lysine acetylation sites 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 11
作者:  Wu, Meiqi;  Yang, Yingxi;  Wang, Hui;  Xu, Yan
收藏  |  浏览/下载:75/0  |  提交时间:2019/04/03
Lysine acetylation  PTMs  Deep learning  
Lysine Malonylation Identification in E-coli with Multiple Features 期刊论文
CURRENT PROTEOMICS, 2019, 卷号: 16, 期号: 3, 页码: 166-174
作者:  Xu, Yan;  Yang, Yingxi;  Wang, Hui;  Shao, Yuanhai
收藏  |  浏览/下载:66/0  |  提交时间:2019/04/03
Malonylation  support vector machine  post translational modification  E. coli  Receive Operating Character (ROC)  Prokaryotes  
LipoSVM: Prediction of Lysine Lipoylation in Proteins based on the Support Vector Machine 期刊论文
CURRENT GENOMICS, 2019, 卷号: 20, 期号: 5, 页码: 362-370
作者:  Wu, Meiqi;  Lu, Pengchao;  Yang, Yingxi;  Liu, Liwen;  Wang, Hui;  Xu, Yan;  Chu, Jixun
收藏  |  浏览/下载:34/0  |  提交时间:2020/12/10
Lysine lipoylation  prediction  amino acids  support vector machine  post-translational modifications  scoring matrix  
IMPMD: An Integrated Method for Predicting Potential Associations Between miRNAs and Diseases 期刊论文
CURRENT GENOMICS, 2019, 卷号: 20, 期号: 8, 页码: 581-591
作者:  Wu, Meiqi;  Yang, Yingxi;  Wang, Hui;  Ding, Jun;  Zhu, Huan;  Xu, Yan
收藏  |  浏览/下载:41/0  |  提交时间:2020/12/10
miRNA  disease  miRNA-disease associations  integrated algorithm  IMPMD  computational methods  
iAcet-Sumo: Identification of lysine acetylation and sumoylation sites in proteins by multi-class transformation methods 期刊论文
COMPUTERS IN BIOLOGY AND MEDICINE, 2018, 卷号: 100, 页码: 144-151
作者:  Yang, Yingxi;  Wang, Hui;  Ding, Jun;  Xu, Yan
收藏  |  浏览/下载:72/0  |  提交时间:2019/12/10