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Genomic and transcriptomic profiling indicates the prognosis significance of mutational signature for TMB-high subtype in Chinese patients with gastric cancer 期刊论文
JOURNAL OF ADVANCED RESEARCH, 2023, 卷号: 51, 页码: 121-134
作者:  Cheng, Yanan;  Bu, Dechao;  Zhang, Qiaoling;  Sun, Rebecca;  Lyle, Stephen;  Zhao, Gang;  Dong, Li;  Li, Hui;  Zhao, Yi;  Yu, Jinpu;  Hao, Xishan
收藏  |  浏览/下载：8/0  |  提交时间：2023/12/04
Gastric cancer  Comprehensive genomic profiling  TMB  Mutational signature  Tumor metabolism  
Biological knowledge graph-guided investigation of immune therapy response in cancer with graph neural network 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2023, 卷号: 24, 期号: 2, 页码: 9
作者:  Zhao, Lianhe;  Qi, Xiaoning;  Chen, Yang;  Qiao, Yixuan;  Bu, Dechao;  Wu, Yang;  Luo, Yufan;  Wang, Sheng;  Zhang, Rui;  Zhao, Yi
收藏  |  浏览/下载：8/0  |  提交时间：2023/12/04
immune checkpoints inhibitors  deep learning  graph neural networks  
High Throughput Transcriptome Data Analysis and Computational Verification Reveal Immunotherapy Biomarkers of Compound Kushen Injection for Treating Triple-Negative Breast Cancer 期刊论文
FRONTIERS IN ONCOLOGY, 2021, 卷号: 11, 页码: 23
作者:  Liu, Xinkui;  Wu, Yang;  Zhang, Yingying;  Bu, Dechao;  Wu, Chao;  Lu, Shan;  Huang, Zhihong;  Song, Yurong;  Zhao, Yi;  Guo, Fengying;  Ye, Peizhi;  Fu, Changgeng;  Shen, Liangliang;  Zhang, Jingyuan;  Wang, Haojia;  Duan, Xianchun;  Wu, Jiarui
收藏  |  浏览/下载：29/0  |  提交时间：2022/06/21
compound kushen injection  triple-negative breast cancer  RNA sequencing  tumor microenvironment  prognostic signature  
ncFANs v2.0: an integrative platform for functional annotation of non-coding RNAs 期刊论文
NUCLEIC ACIDS RESEARCH, 2021, 卷号: 49, 期号: W1, 页码: W459-W468
作者:  Zhang, Yuwei;  Bu, Dechao;  Huo, Peipei;  Wang, Zhihao;  Rong, Hao;  Li, Yanguo;  Liu, Jingjia;  Ye, Meng;  Wu, Yang;  Jiang, Zheng;  Liao, Qi;  Zhao, Yi
收藏  |  浏览/下载：37/0  |  提交时间：2021/12/01
KOBAS-i: intelligent prioritization and exploratory visualization of biological functions for gene enrichment analysis 期刊论文
NUCLEIC ACIDS RESEARCH, 2021, 卷号: 49, 期号: W1, 页码: W317-W325
作者:  Bu, Dechao;  Luo, Haitao;  Huo, Peipei;  Wang, Zhihao;  Zhang, Shan;  He, Zihao;  Wu, Yang;  Zhao, Lianhe;  Liu, Jingjia;  Guo, Jincheng;  Fang, Shuangsang;  Cao, Wanchen;  Yi, Lan;  Zhao, Yi;  Kong, Lei
收藏  |  浏览/下载：56/0  |  提交时间：2021/12/01
FangNet: Mining herb hidden knowledge from TCM clinical effective formulas using structure network algorithm 期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2021, 卷号: 19, 页码: 62-71
作者:  Bu, Dechao;  Xia, Yan;  Zhang, JiaYuan;  Cao, Wanchen;  Huo, Peipei;  Wang, Zhihao;  He, Zihao;  Ding, Linyi;  Wu, Yang;  Zhang, Shan;  Gao, Kai;  Yu, He;  Liu, Tiegang;  Ding, Xia;  Gu, Xiaohong;  Zhao, Yi
收藏  |  浏览/下载：37/0  |  提交时间：2021/12/01
Formulas  Herb  Symptom  TCM  
SymMap: an integrative database of traditional Chinese medicine enhanced by symptom mapping 期刊论文
NUCLEIC ACIDS RESEARCH, 2019, 卷号: 47, 期号: D1, 页码: D1110-D1117
作者:  Wu, Yang;  Zhang, Feilong;  Yang, Kuo;  Fang, Shuangsang;  Bu, Dechao;  Li, Hui;  Sun, Liang;  Hu, Hairuo;  Gao, Kuo;  Wang, Wei;  Zhou, Xuezhong;  Zhao, Yi;  Chen, Jianxin
收藏  |  浏览/下载：267/0  |  提交时间：2019/08/16
NONCODE 2016: an informative and valuable data source of long non-coding RNAs 期刊论文
NUCLEIC ACIDS RESEARCH, 2016, 卷号: 44, 期号: D1, 页码: D203-D208
作者:  Zhao, Yi;  Li, Hui;  Fang, Shuangsang;  Kang, Yue;  Wu, Wei;  Hao, Yajing;  Li, Ziyang;  Bu, Dechao;  Sun, Ninghui;  Zhang, Michael Q.;  Chen, Runsheng
收藏  |  浏览/下载：408/0  |  提交时间：2019/12/13