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TransSurv: Transformer-Based Survival Analysis Model Integrating Histopathological Images and Genomic Data for Colorectal Cancer 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2023, 卷号: 20, 期号: 6, 页码: 3411-3420
作者:  Lv, Zhilong;  Lin, Yuexiao;  Yan, Rui;  Wang, Ying;  Zhang, Fa
收藏  |  浏览/下载：9/0  |  提交时间：2024/05/20
Cancer  Genomics  Bioinformatics  Transformers  Tumors  Feature extraction  Prognostics and health management  Survival analysis  multi-modal learning  transformer  histopathological slides  genomic data  
Macromolecules Structural Classification With a 3D Dilated Dense Network in Cryo-Electron Tomography 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2022, 卷号: 19, 期号: 1, 页码: 209-219
作者:  Gao, Shan;  Han, Renmin;  Zeng, Xiangrui;  Liu, Zhiyong;  Xu, Min;  Zhang, Fa
收藏  |  浏览/下载：18/0  |  提交时间：2022/12/07
Cryo-electron tomography  image classification  convolution neural network  
Improve the Resolution and Parallel Performance of the Three-Dimensional Refine Algorithm in RELION Using CUDA and MPI 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2021, 卷号: 18, 期号: 2, 页码: 583-595
作者:  Zhang, Jingrong;  Wang, Zihao;  Liu, Zhiyong;  Zhang, Fa
收藏  |  浏览/下载：37/0  |  提交时间：2021/12/01
Memory management  Graphics processing units  Arrays  Statistical analysis  Three-dimensional displays  cryoEM  RELION  CUDA  statistical method  Top-k selection  
A Two-Phase Improved Correlation Method for Automatic Particle Selection in Cryo-EM 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2017, 卷号: 14, 期号: 2, 页码: 316-325
作者:  Zhang, Fa;  Chen, Yu;  Ren, Fei;  Wang, Xuan;  Liu, Zhiyong;  Wan, Xiaohua
收藏  |  浏览/下载：57/0  |  提交时间：2019/12/12
Particle selection  feature-based  template-matching  rotation-invariant feature  correlation score functions