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ESA: An efficient sequence alignment algorithm for biological database search on Sunway TaihuLight 期刊论文
PARALLEL COMPUTING, 2023, 卷号: 117, 页码: 11
作者:  Zhang, Hao;  Huang, Zhiyi;  Chen, Yawen;  Liang, Jianguo;  Gao, Xiran
收藏  |  浏览/下载:8/0  |  提交时间:2023/12/04
Hybrid sequence alignment  Biological database search  Sunway TaihuLight  SW26010  Heterogeneous architecture  
Editorial: Computational solutions for microbiome and metagenomics sequencing analyses, Volume II 期刊论文
FRONTIERS IN MOLECULAR BIOSCIENCES, 2023, 卷号: 10, 页码: 2
作者:  Niyogisubizo, Jovial;  Cai, Yunpeng;  Zhang, Lu;  Zhang, Xingyu;  Wei, Yanjie
收藏  |  浏览/下载:7/0  |  提交时间:2023/12/04
gut microbiota  circular RNA biomarkers  metagenomics sequencing  COVID-19  feature selection  machine learning  immune markers  
Identification of circRNA biomarker for gastric cancer through integrated analysis (vol 9, 857320, 2022) 期刊论文
FRONTIERS IN MOLECULAR BIOSCIENCES, 2023, 卷号: 10, 页码: 2
作者:  Hossain, Md. Tofazzal;  Li, Song;  Reza, Md. Selim;  Feng, Shengzhong;  Zhang, Xiaojing;  Jin, Zhe;  Wei, Yanjie;  Peng, Yin
收藏  |  浏览/下载:8/0  |  提交时间:2023/12/04
gastric cancer  circular RNA  computational approach  circRNA biomarker  circRNA-miRNA-gene interaction  
Biological knowledge graph-guided investigation of immune therapy response in cancer with graph neural network 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2023, 卷号: 24, 期号: 2, 页码: 9
作者:  Zhao, Lianhe;  Qi, Xiaoning;  Chen, Yang;  Qiao, Yixuan;  Bu, Dechao;  Wu, Yang;  Luo, Yufan;  Wang, Sheng;  Zhang, Rui;  Zhao, Yi
收藏  |  浏览/下载:8/0  |  提交时间:2023/12/04
immune checkpoints inhibitors  deep learning  graph neural networks  
Validation Methods of Peptide Identification Results in Proteomics* 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125
作者:  Zhou Wen-Jing;  Zeng Wen-Feng;  Chi Hao;  He Si-Min
收藏  |  浏览/下载:8/0  |  提交时间:2023/12/04
proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods  
Validation Methods of Peptide Identification Results in Proteomics br 期刊论文
PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 2023, 卷号: 50, 期号: 1, 页码: 109-125
作者:  Zhou, Wen-Jing;  Zeng, Wen-Feng;  Chi, Hao;  He, Si-Min
收藏  |  浏览/下载:23/0  |  提交时间:2023/12/04
proteomics  mass spectrometry  target-decoy approach  false discovery rate  validation methods  
Improving protein structure prediction using templates and sequence embedding 期刊论文
BIOINFORMATICS, 2023, 卷号: 39, 期号: 1, 页码: 8
作者:  Wu, Fandi;  Jing, Xiaoyang;  Luo, Xiao;  Xu, Jinbo
收藏  |  浏览/下载:7/0  |  提交时间:2023/12/04
EEGDnet: Fusing non-local and local self-similarity for EEG signal denoising with transformer 期刊论文
COMPUTERS IN BIOLOGY AND MEDICINE, 2022, 卷号: 151, 页码: 8
作者:  Pu, Xiaorong;  Yi, Peng;  Chen, Kecheng;  Ma, Zhaoqi;  Zhao, Di;  Ren, Yazhou
收藏  |  浏览/下载:13/0  |  提交时间:2023/07/12
Electroencephalography  Artifact removal  Transformer  
Correction of image distortion in large-field ssEM stitching by an unsupervised intermediate-space solving network 期刊论文
BIOINFORMATICS, 2022, 卷号: 38, 期号: 20, 页码: 4797-4805
作者:  He, Bintao;  Zhang, Yan;  Zhang, Fa;  Han, Renmin
收藏  |  浏览/下载:13/0  |  提交时间:2023/07/12
Identification of Autism spectrum disorder based on a novel feature selection method and Variational Autoencoder 期刊论文
COMPUTERS IN BIOLOGY AND MEDICINE, 2022, 卷号: 148, 页码: 11
作者:  Zhang, Fangyu;  Wei, Yanjie;  Liu, Jin;  Wang, Yanlin;  Xi, Wenhui;  Pan, Yi
收藏  |  浏览/下载:14/0  |  提交时间:2023/07/12
ASD  fMRI  Filter feature selection  VAE  ABIDE  Classification