中国科学院计算技术研究所机构知识库

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限定条件	作者：Chi, Hao    第一作者

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	pValid 2: A deep learning based validation method for peptide identification in shotgun proteomics with increased discriminating power 期刊论文 JOURNAL OF PROTEOMICS, 2022, 卷号: 251, 页码: 9 作者:  Zhou, Wen-Jing;  Wei, Zhuo-Hong;  He, Si-Min;  Chi, Hao 收藏  |  浏览/下载：31/0  |  提交时间：2022/06/21 Proteomics  Tandem mass spectrometry  Retention time  Validation method  Deep learning
	GameTag: A New Sequence Tag Generation Algorithm Based on Cooperative Game Theory 期刊论文 PROTEOMICS, 2020, 页码: 9 作者:  Fei, Zhengcong;  Wang, Kaifei;  Chi, Hao 收藏  |  浏览/下载：52/0  |  提交时间：2020/12/10 cooperative game  deep learning  proteomics  sequence tag generation
	MS/MS Spectrum Prediction for Modified Peptides Using pDeep2 Trained by Transfer Learning 期刊论文 ANALYTICAL CHEMISTRY, 2019, 卷号: 91, 期号: 15, 页码: 9724-9731 作者:  Zeng, Wen-Feng;  Zhou, Xie-Xuan;  Zhou, Wen-Jing;  Chi, Hao;  Zhan, Jianfeng;  He, Si-Min 收藏  |  浏览/下载：77/0  |  提交时间：2019/12/10
	pNovo 3: precise de novo peptide sequencing using a learning-to-rank framework 期刊论文 BIOINFORMATICS, 2019, 卷号: 35, 期号: 14, 页码: I183-I190 作者:  Yang, Hao;  Chi, Hao;  Zeng, Wen-Feng;  Zhou, Wen-Jing;  He, Si-Min 收藏  |  浏览/下载：71/0  |  提交时间：2019/12/10
	pValid: Validation Beyond the Target-Decoy Approach for Peptide Identification in Shotgun Proteomics 期刊论文 JOURNAL OF PROTEOME RESEARCH, 2019, 卷号: 18, 期号: 7, 页码: 2747-2758 作者:  Zhou, Wen-Jing;  Yang, Hao;  Zeng, Wen-Feng;  Zhang, Kun;  Chi, Hao;  He, Si-Min 收藏  |  浏览/下载：247/0  |  提交时间：2019/08/16 tandem mass spectrometry  target-decoy approach  validation methods  false-positive rate  false-negative rate
	pSite: Amino Acid Confidence Evaluation for Quality Control of De Novo Peptide Sequencing and Modification Site Localization 期刊论文 JOURNAL OF PROTEOME RESEARCH, 2018, 卷号: 17, 期号: 1, 页码: 119-128 作者:  Yang, Hao;  Chi, Hao;  Zhou, Wen-Jing;  Zeng, Wen-Feng;  Liu, Chao;  Wang, Rui-Min;  Wang, Zhao-Wei;  Niu, Xiu-Nan;  Chen, Zhen-Lin;  He, Si-Min 收藏  |  浏览/下载：71/0  |  提交时间：2019/12/10 tandem mass spectrometry  de novo peptide sequencing  modification site localization  phosphorylation
	pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning 期刊论文 ANALYTICAL CHEMISTRY, 2017, 卷号: 89, 期号: 23, 页码: 12690-12697 作者:  Zhou, Xie-Xuan;  Zeng, Wen-Feng;  Chi, Hao;  Luo, Chunjie;  Liu, Chao;  Zhan, Jianfeng;  He, Si-Min;  Zhang, Zhifei 收藏  |  浏览/下载：67/0  |  提交时间：2019/12/10
	Open-pNovo: De Novo Peptide Sequencing with Thousands of Protein Modifications 期刊论文 JOURNAL OF PROTEOME RESEARCH, 2017, 卷号: 16, 期号: 2, 页码: 645-654 作者:  Yang, Hao;  Chi, Hao;  Zhou, Wen-Jing;  Zeng, Wen-Feng;  He, Kun;  Liu, Chao;  Sun, Rui-Xiang;  He, Si-Min 收藏  |  浏览/下载：50/0  |  提交时间：2019/12/12 tandem mass spectrometry  de novo peptide sequencing  dynamic programming  unexpected modifications
	An efficient parallelization of phosphorylated peptide and protein identification 期刊论文 RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 2010, 卷号: 24, 期号: 12, 页码: 1791-1798 作者:  Wang, Leheng;  Wang, Wenping;  Chi, Hao;  Wu, Yanjie;  Li, You;  Fu, Yan;  Zhou, Chen;  Sun, Ruixiang;  Wang, Haipeng;  Liu, Chao;  Yuan, Zuofei;  Xiu, Liyun;  He, Si-Min 收藏  |  浏览/下载：53/0  |  提交时间：2019/12/16
	pNovo: De novo Peptide Sequencing and Identification Using HCD Spectra 期刊论文 JOURNAL OF PROTEOME RESEARCH, 2010, 卷号: 9, 期号: 5, 页码: 2713-2724 作者:  Chi, Hao;  Sun, Rui-Xiang;  Yang, Bing;  Song, Chun-Qing;  Wang, Le-Heng;  Liu, Chao;  Fu, Yan;  Yuan, Zuo-Fei;  Wang, Hai-Peng;  He, Si-Min;  Dong, Meng-Qiu 收藏  |  浏览/下载：60/0  |  提交时间：2019/12/16 tandem mass spectrometry  HCD  de novo sequencing  pNovo