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Seq-SetNet: directly exploiting multiple sequence alignment for protein secondary structure prediction 期刊论文
BIOINFORMATICS, 2022, 卷号: 38, 期号: 4, 页码: 990-996
作者:  Ju, Fusong;  Zhu, Jianwei;  Zhang, Qi;  Wei, Guozheng;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo
收藏  |  浏览/下载:19/0  |  提交时间:2022/12/07
ProALIGN: Directly Learning Alignments for Protein Structure Prediction via Exploiting Context-Specific Alignment Motifs 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2022, 页码: 14
作者:  Kong, Lupeng;  Ju, Fusong;  Zheng, Wei-mou;  Zhu, Jianwei;  Sun, Shiwei;  Xu, Jinbo;  Bu, Dongbo
收藏  |  浏览/下载:19/0  |  提交时间:2022/12/07
deep learning and protein threading  protein alignment  protein structure prediction  
NeuO: Exploiting the sentimental bias between ratings and reviews with neural networks 期刊论文
NEURAL NETWORKS, 2019, 卷号: 111, 页码: 77-88
作者:  Xu, Yuanbo;  Yang, Yongjian;  Han, Jiayu;  Wang, En;  Zhuang, Fuzhen;  Yang, Jingyuan;  Xiong, Hui
收藏  |  浏览/下载:259/0  |  提交时间:2019/04/03
Opinion bias  Recommender systems  Convolutional neural network  Dual attention vectors  
A deep learning method to more accurately recall known lysine acetylation sites 期刊论文
BMC BIOINFORMATICS, 2019, 卷号: 20, 页码: 11
作者:  Wu, Meiqi;  Yang, Yingxi;  Wang, Hui;  Xu, Yan
收藏  |  浏览/下载:76/0  |  提交时间:2019/04/03
Lysine acetylation  PTMs  Deep learning  
LipoSVM: Prediction of Lysine Lipoylation in Proteins based on the Support Vector Machine 期刊论文
CURRENT GENOMICS, 2019, 卷号: 20, 期号: 5, 页码: 362-370
作者:  Wu, Meiqi;  Lu, Pengchao;  Yang, Yingxi;  Liu, Liwen;  Wang, Hui;  Xu, Yan;  Chu, Jixun
收藏  |  浏览/下载:35/0  |  提交时间:2020/12/10
Lysine lipoylation  prediction  amino acids  support vector machine  post-translational modifications  scoring matrix  
COMSAT: Residue contact prediction of transmembrane proteins based on support vector machines and mixed integer linear programming 期刊论文
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 2016, 卷号: 84, 期号: 3, 页码: 332-348
作者:  Zhang, Huiling;  Huang, Qingsheng;  Bei, Zhendong;  Wei, Yanjie;  Floudas, Christodoulos A.
收藏  |  浏览/下载:42/0  |  提交时间:2019/12/13
protein structure prediction  hybrid framework  machine learning  ab initio prediction  MILP