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pDeepXL: MS/MS Spectrum Prediction for Cross-Linked Peptide Pairs by Deep Learning 期刊论文
JOURNAL OF PROTEOME RESEARCH, 2021, 卷号: 20, 期号: 5, 页码: 2570-2582
作者:  Chen, Zhen-Lin;  Mao, Peng-Zhi;  Zeng, Wen-Feng;  Chi, Hao;  He, Si-Min
收藏  |  浏览/下载:56/0  |  提交时间:2021/12/01
cross-linking mass spectrometry  spectrum prediction  deep learning  transfer learning  online fine-tuning  
TagDict: Prediction of Theoretical Spectra of Peptides Based on A Tag Dictionary 期刊论文
CURRENT BIOINFORMATICS, 2018, 卷号: 13, 期号: 5, 页码: 444-449
作者:  Wang, Yaojun;  Zhang, Jingwei;  Bu, Dongbo;  Sun, Shiwei
收藏  |  浏览/下载:76/0  |  提交时间:2019/12/10
Mass spectrometry  theoretical spectrum prediction  database search  peptide identification  TagDict  MassAnalyzer  
OpenMS-Simulator: an open-source software for theoretical tandem mass spectrum prediction 期刊论文
BMC Bioinformatics, 2015, 卷号: 16, 期号: 1
作者:  Wang,Yaojun;  Yang,Fei;  Wu,Peng;  Bu,Dongbo;  Sun,Shiwei
收藏  |  浏览/下载:65/0  |  提交时间:2019/12/10
Mass spectrometry  Theoretical spectrum prediction  Peptide identification