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pSite: Amino Acid Confidence Evaluation for Quality Control of De Novo Peptide Sequencing and Modification Site Localization 期刊论文
JOURNAL OF PROTEOME RESEARCH, 2018, 卷号: 17, 期号: 1, 页码: 119-128
作者:  Yang, Hao;  Chi, Hao;  Zhou, Wen-Jing;  Zeng, Wen-Feng;  Liu, Chao;  Wang, Rui-Min;  Wang, Zhao-Wei;  Niu, Xiu-Nan;  Chen, Zhen-Lin;  He, Si-Min
收藏  |  浏览/下载:82/0  |  提交时间:2019/12/10
tandem mass spectrometry  de novo peptide sequencing  modification site localization  phosphorylation  
Open-pNovo: De Novo Peptide Sequencing with Thousands of Protein Modifications 期刊论文
JOURNAL OF PROTEOME RESEARCH, 2017, 卷号: 16, 期号: 2, 页码: 645-654
作者:  Yang, Hao;  Chi, Hao;  Zhou, Wen-Jing;  Zeng, Wen-Feng;  He, Kun;  Liu, Chao;  Sun, Rui-Xiang;  He, Si-Min
收藏  |  浏览/下载:58/0  |  提交时间:2019/12/12
tandem mass spectrometry  de novo peptide sequencing  dynamic programming  unexpected modifications  
Improved Peptide Identification for Proteomic Analysis Based on Comprehensive Characterization of Electron Transfer Dissociation Spectra 期刊论文
JOURNAL OF PROTEOME RESEARCH, 2010, 卷号: 9, 期号: 12, 页码: 6354-6367
作者:  Sun, Rui-Xiang;  Dong, Meng-Qiu;  Song, Chun-Qing;  Chi, Hao;  Yang, Bing;  Xiu, Li-Yun;  Tao, Li;  Jing, Ziu-Yi;  Liu, Chao;  Wang, Le-Heng;  Fu, Yan;  He, Si-Min
收藏  |  浏览/下载:68/0  |  提交时间:2019/12/16
ETD  hydrogen rearrangement  peptide sequencing  search engine  
Predicting molecular formulas of fragment ions with isotope patterns in tandem mass spectra 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2005, 卷号: 2, 期号: 3, 页码: 217-230
作者:  Zhang, JF;  Gao, W;  Cai, JJ;  He, SM;  Zeng, R;  Chen, RS
收藏  |  浏览/下载:43/0  |  提交时间:2019/12/16
isotope patterns  peptide sequencing  tandem mass spectra