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Pathway-Aware Multimodal Transformer (PAMT): Integrating Pathological Image and Gene Expression for Interpretable Cancer Survival Analysis 期刊论文
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2026, 卷号: 48, 期号: 1, 页码: 896-913
作者:  Yan, Rui;  Zhang, Xueyuan;  Jiang, Zihang;  Wang, Baizhi;  Bian, Xiuwu;  Ren, Fei;  Zhou, S. Kevin
收藏  |  浏览/下载:1/0  |  提交时间:2026/05/25
Pathology  Cancer  Transformers  Feature extraction  Data models  Biological system modeling  Analytical models  Deep learning  Semantics  Multimodal transformer  model interpretability  survival analysis  pathological image analysis  gene expression  gene expression  
PPRTGI: A Personalized PageRank Graph Neural Network for TF-Target Gene Interaction Detection 期刊论文
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2024, 卷号: 21, 期号: 3, 页码: 480-491
作者:  Ma, Ke;  Li, Jiawei;  Zhao, Mengyuan;  Zamit, Ibrahim;  Lin, Bin;  Guo, Fei;  Tang, Jijun
收藏  |  浏览/下载:57/0  |  提交时间:2024/12/06
DNA  Proteins  Organisms  Biology  Proteomics  Gene expression  Feature extraction  Transcription factor  TF-target gene interactions  DNA sequence  graph neural network  personalized PageRank  
Disclosing Potential Key Genes, Therapeutic Targets and Agents for Non-Small Cell Lung Cancer: Evidence from Integrative Bioinformatics Analysis 期刊论文
VACCINES, 2022, 卷号: 10, 期号: 5, 页码: 20
作者:  Mosharaf, Md Parvez;  Reza, Md Selim;  Gov, Esra;  Mahumud, Rashidul Alam;  Mollah, Md Nurul Haque
收藏  |  浏览/下载:76/0  |  提交时间:2022/12/07
non-small cell lung cancer  gene expression profiles  molecular signatures  therapeutic targets and agents  integrated bioinformatics approaches