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ExomiRHub: A comprehensive database for hosting and analyzing human disease-related extracellular microRNA transcriptomics data 期刊论文
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL, 2024, 卷号: 23, 页码: 3104-3116
作者:  Liu, Yang;  Min, Zhuochao;  Mo, Jing;  Ju, Zhen;  Chen, Jianliang;  Liang, Weiling;  Zhang, Lantian;  Li, Hanguang;  Chan, Godfrey Chi-Fung;  Wei, Yanjie;  Zhang, Wenliang
收藏  |  浏览/下载:1/0  |  提交时间:2024/12/06
MiRNA  Extracellular vesicle  Exosome  Cancer  Liquid biopsy  
Attention-Guided Residual U-Net with SE Connection and ASPP for Watershed-Based Cell Segmentation in Microscopy Images 期刊论文
JOURNAL OF COMPUTATIONAL BIOLOGY, 2024, 页码: 13
作者:  Niyogisubizo, Jovial;  Zhao, Keliang;  Meng, Jintao;  Pan, Yi;  Didi, Rosiy Adi;  Wei, Yanjie
收藏  |  浏览/下载:2/0  |  提交时间:2024/12/06
cell segmentation  deep learning  watershed segmentation  bright-field microscopy  iPS cell reprogramming  attention mechanism  
A new paradigm for applying deep learning to protein-ligand interaction prediction 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2024, 卷号: 25, 期号: 3, 页码: 12
作者:  Wang, Zechen;  Wang, Sheng;  Li, Yangyang;  Guo, Jingjing;  Wei, Yanjie;  Mu, Yuguang;  Zheng, Liangzhen;  Li, Weifeng
收藏  |  浏览/下载:2/0  |  提交时间:2024/12/06
protein-ligand interaction  scoring function  deep learning  graph neural network  
Design, in silico evaluation, and in vitro verification of new bivalent Smac mimetics with pro-apoptotic activity 期刊论文
METHODS, 2024, 卷号: 224, 页码: 35-46
作者:  Huang, Qingsheng;  Peng, Yin;  Peng, Yuefeng;  Lin, Huijuan;  Deng, Shiqi;  Feng, Shengzhong;  Wei, Yanjie
收藏  |  浏览/下载:2/0  |  提交时间:2024/12/06
XIAP  Apoptosis  Antagonist  Smac mimetic  Caspase-3  Caspase-9  
Evaluation of CircRNA sequence assembly methods using long reads (vol 13, 816825, 2022) 期刊论文
FRONTIERS IN GENETICS, 2023, 卷号: 14, 页码: 1
作者:  Zhang, Jingjing;  Hossain, Md. Tofazzal;  Liu, Weiguo;  Peng, Yin;  Pan, Yi;  Wei, Yanjie
收藏  |  浏览/下载:18/0  |  提交时间:2023/12/04
circRNA  full-length sequences  short reads  long reads  assembly  
Identification of circRNA biomarker for gastric cancer through integrated analysis (vol 9, 857320, 2022) 期刊论文
FRONTIERS IN MOLECULAR BIOSCIENCES, 2023, 卷号: 10, 页码: 2
作者:  Hossain, Md. Tofazzal;  Li, Song;  Reza, Md. Selim;  Feng, Shengzhong;  Zhang, Xiaojing;  Jin, Zhe;  Wei, Yanjie;  Peng, Yin
收藏  |  浏览/下载:15/0  |  提交时间:2023/12/04
gastric cancer  circular RNA  computational approach  circRNA biomarker  circRNA-miRNA-gene interaction