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Evaluation of CircRNA sequence assembly methods using long reads (vol 13, 816825, 2022) 期刊论文
FRONTIERS IN GENETICS, 2023, 卷号: 14, 页码: 1
作者:  Zhang, Jingjing;  Hossain, Md. Tofazzal;  Liu, Weiguo;  Peng, Yin;  Pan, Yi;  Wei, Yanjie
收藏  |  浏览/下载：18/0  |  提交时间：2023/12/04
circRNA  full-length sequences  short reads  long reads  assembly  
Vimentin binds to a novel tumor suppressor protein, GSPT1-238aa, encoded by circGSPT1 with a selective encoding priority to halt autophagy in gastric carcinoma 期刊论文
CANCER LETTERS, 2022, 卷号: 545, 页码: 14
作者:  Hu, Fan;  Peng, Yin;  Chang, Shanshan;  Luo, Xiaonuan;  Yuan, Yuan;  Zhu, Xiaohui;  Xu, Yidan;  Du, Kaining;  Chen, Yang;  Deng, Shiqi;  Yu, Fan;  Feng, Xianling;  Fan, Xinmin;  Ashktorab, Hassan;  Smoot, Duane;  Meltzer, Stephen J.;  Li, Song;  Wei, Yanjie;  Zhang, Xiaojing;  Jin, Zhe
收藏  |  浏览/下载：39/0  |  提交时间：2022/12/07
Circular RNAs  circGSPT1  Autophagy  Translation  Gastric cancer  
Circ_CEA promotes the interaction between the p53 and cyclin-dependent kinases 1 as a scaffold to inhibit the apoptosis of gastric cancer 期刊论文
CELL DEATH & DISEASE, 2022, 卷号: 13, 期号: 9, 页码: 15
作者:  Yuan, Yuan;  Zhang, Xiaojing;  Du, Kaining;  Zhu, Xiaohui;  Chang, Shanshan;  Chen, Yang;  Xu, Yidan;  Sun, Jiachun;  Luo, Xiaonuan;  Deng, Shiqi;  Qin, Ying;  Feng, Xianling;  Wei, Yanjie;  Fan, Xinmin;  Liu, Ziyang;  Zheng, Baixin;  Ashktorab, Hassan;  Smoot, Duane;  Li, Song;  Xie, Xiaoxun;  Jin, Zhe;  Peng, Yin
收藏  |  浏览/下载：23/0  |  提交时间：2023/07/12
Evaluation of CircRNA Sequence Assembly Methods Using Long Reads 期刊论文
FRONTIERS IN GENETICS, 2022, 卷号: 13, 页码: 12
作者:  Zhang, Jingjing;  Hossain, Md. Tofazzal;  Liu, Weiguo;  Peng, Yin;  Pan, Yi;  Wei, Yanjie
收藏  |  浏览/下载：27/0  |  提交时间：2022/12/07
circRNA  full-length sequences  short reads  long reads  assembly  
A novel protein AXIN1-295aa encoded by circAXIN1 activates the Wnt/beta-catenin signaling pathway to promote gastric cancer progression 期刊论文
MOLECULAR CANCER, 2021, 卷号: 20, 期号: 1, 页码: 19
作者:  Peng, Yin;  Xu, Yidan;  Zhang, Xiaojing;  Deng, Shiqi;  Yuan, Yuan;  Luo, Xiaonuan;  Hossain, Md Tofazzal;  Zhu, Xiaohui;  Du, Kaining;  Hu, Fan;  Chen, Yang;  Chang, Shanshan;  Feng, Xianling;  Fan, Xinmin;  Ashktorab, Hassan;  Smoot, Duane;  Meltzer, Stephen J.;  Hou, Gangqiang;  Wei, Yanjie;  Li, Song;  Qin, Ying;  Jin, Zhe
收藏  |  浏览/下载：42/0  |  提交时间：2022/06/21
AXIN1  Wnt  Translation  circRNA  
Dual activation of Hedgehog and Wnt/beta-catenin signaling pathway caused by downregulation of SUFU targeted by miRNA-150 in human gastric cancer 期刊论文
AGING-US, 2021, 卷号: 13, 期号: 7, 页码: 10749-10769
作者:  Peng, Yin;  Zhang, Xiaojing;  Lin, Huijuan;  Deng, Shiqi;  Qin, Ying;  He, Jieqiong;  Hu, Fan;  Zhu, Xiaohui;  Feng, Xianling;  Wang, Jian;  Wei, Yanjie;  Fan, Xinmin;  Lin, Huan;  Ashktorab, Hassan;  Smoot, Duane;  Lv, Yansi;  Li, Song;  Meltzer, Stephen J.;  Jin, Zhe
收藏  |  浏览/下载：47/0  |  提交时间：2021/12/01
miRNA-150  SUFU  Wnt/beta-catenin  hedgehog  EMT  
A novel virtual screening procedure identifies Pralatrexate as inhibitor of SARS-CoV-2 RdRp and it reduces viral replication in vitro 期刊论文
PLOS COMPUTATIONAL BIOLOGY, 2020, 卷号: 16, 期号: 12, 页码: 20
作者:  Zhang, Haiping;  Yang, Yang;  Li, Junxin;  Wang, Min;  Saravanan, Konda Mani;  Wei, Jinli;  Ng, Justin Tze-Yang;  Hossain, Md Tofazzal;  Liu, Maoxuan;  Zhang, Huiling;  Ren, Xiaohu;  Pan, Yi;  Peng, Yin;  Shi, Yi;  Wan, Xiaochun;  Liu, Yingxia;  Wei, Yanjie
收藏  |  浏览/下载：48/0  |  提交时间：2021/12/01
Histone methyltransferase SET8 is regulated by miR-192/215 and induces oncogene-induced senescence via p53-dependent DNA damage in human gastric carcinoma cells 期刊论文
CELL DEATH & DISEASE, 2020, 卷号: 11, 期号: 10, 页码: 15
作者:  Zhang, Xiaojing;  Peng, Yin;  Yuan, Yuan;  Gao, Yuli;  Hu, Fan;  Wang, Jian;  Zhu, Xiaohui;  Feng, Xianling;  Cheng, Yulan;  Wei, Yanjie;  Fan, Xinmin;  Xie, Yaohong;  Lv, Yansi;  Ashktorab, Hassan;  Smoot, Duane;  Li, Song;  Meltzer, Stephen J.;  Hou, Gangqiang;  Jin, Zhe
收藏  |  浏览/下载：51/0  |  提交时间：2021/12/01
SUFU mediates EMT and Wnt/beta-catenin signaling pathway activation promoted by miRNA-324-5p in human gastric cancer 期刊论文
CELL CYCLE, 2020, 页码: 14
作者:  Peng, Yin;  Zhang, Xiaojing;  Lin, Huijuan;  Deng, Shiqi;  Qin, Ying;  Yuan, Yuan;  Feng, Xianling;  Wang, Jian;  Chen, Wangchun;  Hu, Fan;  Yan, Ruibin;  Zhao, Yanqiu;  Cheng, Yulan;  Wei, Yanjie;  Fan, Xinmin;  Ashktorab, Hassan;  Smoot, Duane;  Li, Song;  Meltzer, Stephen J.;  Jin, Zhe
收藏  |  浏览/下载：64/0  |  提交时间：2020/12/10
miRNA-324-5p  SUFU negative regulator of hedgehog signaling  Wnt/beta-catenin  EMT  
Deep Learning Based Drug Screening for Novel Coronavirus 2019-nCov 期刊论文
INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES, 2020, 页码: 9
作者:  Zhang, Haiping;  Saravanan, Konda Mani;  Yang, Yang;  Hossain, Md Tofazzal;  Li, Junxin;  Ren, Xiaohu;  Pan, Yi;  Wei, Yanjie
收藏  |  浏览/下载：61/0  |  提交时间：2020/12/10
Coronavirus  Deep learning  Drug screening  Homology modeling  3C-like protease