中国科学院计算技术研究所机构知识库

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	A universal database reduction method based on the sequence tag strategy to facilitate large-scale database search in proteomics 期刊论文 INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2023, 卷号: 483, 页码: 11 作者:  Wang, Kai-Fei;  Wu, Yu-Zhuo;  Chi, Hao 收藏  |  浏览/下载：13/0  |  提交时间：2023/07/12
	pValid 2: A deep learning based validation method for peptide identification in shotgun proteomics with increased discriminating power 期刊论文 JOURNAL OF PROTEOMICS, 2022, 卷号: 251, 页码: 9 作者:  Zhou, Wen-Jing;  Wei, Zhuo-Hong;  He, Si-Min;  Chi, Hao 收藏  |  浏览/下载：31/0  |  提交时间：2022/06/21 Proteomics  Tandem mass spectrometry  Retention time  Validation method  Deep learning
	pDeep3: Toward More Accurate Spectrum Prediction with Fast Few-Shot Learning 期刊论文 ANALYTICAL CHEMISTRY, 2021, 卷号: 93, 期号: 14, 页码: 5815-5822 作者:  Tarn, Ching;  Zeng, Wen-Feng 收藏  |  浏览/下载：31/0  |  提交时间：2021/12/01
	MS/MS Spectrum Prediction for Modified Peptides Using pDeep2 Trained by Transfer Learning 期刊论文 ANALYTICAL CHEMISTRY, 2019, 卷号: 91, 期号: 15, 页码: 9724-9731 作者:  Zeng, Wen-Feng;  Zhou, Xie-Xuan;  Zhou, Wen-Jing;  Chi, Hao;  Zhan, Jianfeng;  He, Si-Min 收藏  |  浏览/下载：77/0  |  提交时间：2019/12/10
	pSite: Amino Acid Confidence Evaluation for Quality Control of De Novo Peptide Sequencing and Modification Site Localization 期刊论文 JOURNAL OF PROTEOME RESEARCH, 2018, 卷号: 17, 期号: 1, 页码: 119-128 作者:  Yang, Hao;  Chi, Hao;  Zhou, Wen-Jing;  Zeng, Wen-Feng;  Liu, Chao;  Wang, Rui-Min;  Wang, Zhao-Wei;  Niu, Xiu-Nan;  Chen, Zhen-Lin;  He, Si-Min 收藏  |  浏览/下载：71/0  |  提交时间：2019/12/10 tandem mass spectrometry  de novo peptide sequencing  modification site localization  phosphorylation
	pDeep: Predicting MS/MS Spectra of Peptides with Deep Learning 期刊论文 ANALYTICAL CHEMISTRY, 2017, 卷号: 89, 期号: 23, 页码: 12690-12697 作者:  Zhou, Xie-Xuan;  Zeng, Wen-Feng;  Chi, Hao;  Luo, Chunjie;  Liu, Chao;  Zhan, Jianfeng;  He, Si-Min;  Zhang, Zhifei 收藏  |  浏览/下载：67/0  |  提交时间：2019/12/10
	Immunopurification and Mass Spectrometry Identifies Protein Phosphatase 2A (PP2A) and BIN2/GSK3 as Regulators of AKS Transcription Factors in Arabidopsis 期刊论文 MOLECULAR PLANT, 2017, 卷号: 10, 期号: 2, 页码: 345-348 作者:  Bu, Shuo-Lei;  Liu, Chao;  Liu, Ning;  Zhao, Ji-Long;  Ai, Lian-Feng;  Chi, Hao;  Li, Kathy L.;  Chien, Chih-Wei;  Burlingame, Alma L.;  Zhang, Sheng-Wei;  Wang, Zhi-Yong 收藏  |  浏览/下载：65/0  |  提交时间：2019/12/12
	Open-pNovo: De Novo Peptide Sequencing with Thousands of Protein Modifications 期刊论文 JOURNAL OF PROTEOME RESEARCH, 2017, 卷号: 16, 期号: 2, 页码: 645-654 作者:  Yang, Hao;  Chi, Hao;  Zhou, Wen-Jing;  Zeng, Wen-Feng;  He, Kun;  Liu, Chao;  Sun, Rui-Xiang;  He, Si-Min 收藏  |  浏览/下载：50/0  |  提交时间：2019/12/12 tandem mass spectrometry  de novo peptide sequencing  dynamic programming  unexpected modifications