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A new paradigm for applying deep learning to protein-ligand interaction prediction 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2024, 卷号: 25, 期号: 3, 页码: 12
作者:  Wang, Zechen;  Wang, Sheng;  Li, Yangyang;  Guo, Jingjing;  Wei, Yanjie;  Mu, Yuguang;  Zheng, Liangzhen;  Li, Weifeng
收藏  |  浏览/下载：17/0  |  提交时间：2024/12/06
protein-ligand interaction  scoring function  deep learning  graph neural network  
JCcirc: circRNA full-length sequence assembly through integrated junction contigs 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2023, 卷号: 24, 期号: 6, 页码: 11
作者:  Zhang, Jingjing;  Zhang, Huiling;  Ju, Zhen;  Peng, Yin;  Pan, Yi;  Xi, Wenhui;  Wei, Yanjie
收藏  |  浏览/下载：32/0  |  提交时间：2024/05/20
circRNA  full-length sequence  transcriptome  junction contig  
Biological knowledge graph-guided investigation of immune therapy response in cancer with graph neural network 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2023, 卷号: 24, 期号: 2, 页码: 9
作者:  Zhao, Lianhe;  Qi, Xiaoning;  Chen, Yang;  Qiao, Yixuan;  Bu, Dechao;  Wu, Yang;  Luo, Yufan;  Wang, Sheng;  Zhang, Rui;  Zhao, Yi
收藏  |  浏览/下载：29/0  |  提交时间：2023/12/04
immune checkpoints inhibitors  deep learning  graph neural networks  
Identification and function annotation of long intervening noncoding RNAs 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2017, 卷号: 18, 期号: 5, 页码: 789-797
作者:  Luo, Haitao;  Bu, Dechao;  Sun, Liang;  Fang, Shuangsang;  Liu, Zhiyong;  Zhao, Yi
收藏  |  浏览/下载：89/0  |  提交时间：2019/12/12
transcriptom sequencing  noncoding RNAs  gene identification  function annotation  network analysis  computational method  
Drug-target interaction prediction: databases, web servers and computational models 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2016, 卷号: 17, 期号: 4, 页码: 696-712
作者:  Chen, Xing;  Yan, Chenggang Clarence;  Zhang, Xiaotian;  Zhang, Xu;  Dai, Feng;  Yin, Jian;  Zhang, Yongdong
收藏  |  浏览/下载：78/0  |  提交时间：2019/12/13
drug-target interactions prediction  drug discovery  computational models  biological networks  machine learning