中国科学院计算技术研究所机构知识库

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	Single-sequence protein structure prediction by integrating protein language models 期刊论文 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2024, 卷号: 121, 期号: 13, 页码: 7 作者:  Jing, Xiaoyang;  Wu, Fandi;  Luo, Xiao;  Xu, Jinbo 收藏  |  浏览/下载：2/0  |  提交时间：2024/05/20 protein structure prediction  protein language model  single-sequence protein structure rediction  antibody structure prediction  single mutation effect
	ESA: An efficient sequence alignment algorithm for biological database search on Sunway TaihuLight 期刊论文 PARALLEL COMPUTING, 2023, 卷号: 117, 页码: 11 作者:  Zhang, Hao;  Huang, Zhiyi;  Chen, Yawen;  Liang, Jianguo;  Gao, Xiran 收藏  |  浏览/下载：7/0  |  提交时间：2023/12/04 Hybrid sequence alignment  Biological database search  Sunway TaihuLight  SW26010  Heterogeneous architecture
	Improving protein structure prediction using templates and sequence embedding 期刊论文 BIOINFORMATICS, 2023, 卷号: 39, 期号: 1, 页码: 8 作者:  Wu, Fandi;  Jing, Xiaoyang;  Luo, Xiao;  Xu, Jinbo 收藏  |  浏览/下载：7/0  |  提交时间：2023/12/04
	Seq-SetNet: directly exploiting multiple sequence alignment for protein secondary structure prediction 期刊论文 BIOINFORMATICS, 2022, 卷号: 38, 期号: 4, 页码: 990-996 作者:  Ju, Fusong;  Zhu, Jianwei;  Zhang, Qi;  Wei, Guozheng;  Sun, Shiwei;  Zheng, Wei-Mou;  Bu, Dongbo 收藏  |  浏览/下载：18/0  |  提交时间：2022/12/07
	ProALIGN: Directly Learning Alignments for Protein Structure Prediction via Exploiting Context-Specific Alignment Motifs 期刊论文 JOURNAL OF COMPUTATIONAL BIOLOGY, 2022, 页码: 14 作者:  Kong, Lupeng;  Ju, Fusong;  Zheng, Wei-mou;  Zhu, Jianwei;  Sun, Shiwei;  Xu, Jinbo;  Bu, Dongbo 收藏  |  浏览/下载：18/0  |  提交时间：2022/12/07 deep learning and protein threading  protein alignment  protein structure prediction
	FALCON2: a web server for high-quality prediction of protein tertiary structures 期刊论文 BMC BIOINFORMATICS, 2021, 卷号: 22, 期号: 1, 页码: 14 作者:  Kong, Lupeng;  Ju, Fusong;  Zhang, Haicang;  Sun, Shiwei;  Bu, Dongbo 收藏  |  浏览/下载：37/0  |  提交时间：2021/12/01 Protein structure prediction  Template-based modeling  Ab initio prediction  Protein structure prediction web service
	CopulaNet: Learning residue co-evolution directly from multiple sequence alignment for protein structure prediction 期刊论文 NATURE COMMUNICATIONS, 2021, 卷号: 12, 期号: 1, 页码: 9 作者:  Ju, Fusong;  Zhu, Jianwei;  Shao, Bin;  Kong, Lupeng;  Liu, Tie-Yan;  Zheng, Wei-Mou;  Bu, Dongbo 收藏  |  浏览/下载：35/0  |  提交时间：2021/12/01
	Deep template-based protein structure prediction 期刊论文 PLOS COMPUTATIONAL BIOLOGY, 2021, 卷号: 17, 期号: 5, 页码: 18 作者:  Wu, Fandi;  Xu, Jinbo 收藏  |  浏览/下载：30/0  |  提交时间：2021/12/01
	Deep Learning Based Drug Screening for Novel Coronavirus 2019-nCov 期刊论文 INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES, 2020, 页码: 9 作者:  Zhang, Haiping;  Saravanan, Konda Mani;  Yang, Yang;  Hossain, Md Tofazzal;  Li, Junxin;  Ren, Xiaohu;  Pan, Yi;  Wei, Yanjie 收藏  |  浏览/下载：52/0  |  提交时间：2020/12/10 Coronavirus  Deep learning  Drug screening  Homology modeling  3C-like protease
	Fine-grained alignment of cryo-electron subtomograms based on MPI parallel optimization 期刊论文 BMC BIOINFORMATICS, 2019, 卷号: 20, 期号: 1, 页码: 13 作者:  Lu, Yongchun;  Zeng, Xiangrui;  Zhao, Xiaofang;  Li, Shirui;  Li, Hua;  Gao, Xin;  Xu, Min 收藏  |  浏览/下载：76/0  |  提交时间：2019/12/10 Stochastic average gradient  Fine-grained alignment  Cryo-ET  MPI