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JCcirc: circRNA full-length sequence assembly through integrated junction contigs 期刊论文
BRIEFINGS IN BIOINFORMATICS, 2023, 卷号: 24, 期号: 6, 页码: 11
作者:  Zhang, Jingjing;  Zhang, Huiling;  Ju, Zhen;  Peng, Yin;  Pan, Yi;  Xi, Wenhui;  Wei, Yanjie
收藏  |  浏览/下载：2/0  |  提交时间：2024/05/20
circRNA  full-length sequence  transcriptome  junction contig  
Editorial: Computational solutions for microbiome and metagenomics sequencing analyses, Volume II 期刊论文
FRONTIERS IN MOLECULAR BIOSCIENCES, 2023, 卷号: 10, 页码: 2
作者:  Niyogisubizo, Jovial;  Cai, Yunpeng;  Zhang, Lu;  Zhang, Xingyu;  Wei, Yanjie
收藏  |  浏览/下载：7/0  |  提交时间：2023/12/04
gut microbiota  circular RNA biomarkers  metagenomics sequencing  COVID-19  feature selection  machine learning  immune markers  
Identification of circRNA biomarker for gastric cancer through integrated analysis (vol 9, 857320, 2022) 期刊论文
FRONTIERS IN MOLECULAR BIOSCIENCES, 2023, 卷号: 10, 页码: 2
作者:  Hossain, Md. Tofazzal;  Li, Song;  Reza, Md. Selim;  Feng, Shengzhong;  Zhang, Xiaojing;  Jin, Zhe;  Wei, Yanjie;  Peng, Yin
收藏  |  浏览/下载：8/0  |  提交时间：2023/12/04
gastric cancer  circular RNA  computational approach  circRNA biomarker  circRNA-miRNA-gene interaction  
Vimentin binds to a novel tumor suppressor protein, GSPT1-238aa, encoded by circGSPT1 with a selective encoding priority to halt autophagy in gastric carcinoma 期刊论文
CANCER LETTERS, 2022, 卷号: 545, 页码: 14
作者:  Hu, Fan;  Peng, Yin;  Chang, Shanshan;  Luo, Xiaonuan;  Yuan, Yuan;  Zhu, Xiaohui;  Xu, Yidan;  Du, Kaining;  Chen, Yang;  Deng, Shiqi;  Yu, Fan;  Feng, Xianling;  Fan, Xinmin;  Ashktorab, Hassan;  Smoot, Duane;  Meltzer, Stephen J.;  Li, Song;  Wei, Yanjie;  Zhang, Xiaojing;  Jin, Zhe
收藏  |  浏览/下载：29/0  |  提交时间：2022/12/07
Circular RNAs  circGSPT1  Autophagy  Translation  Gastric cancer  
An Efficient Modern Strategy to Screen Drug Candidates Targeting RdRp of SARS-CoV-2 With Potentially High Selectivity and Specificity 期刊论文
FRONTIERS IN CHEMISTRY, 2022, 卷号: 10, 页码: 13
作者:  Zhang, Haiping;  Gong, Xiaohua;  Peng, Yun;  Saravanan, Konda Mani;  Bian, Hengwei;  Zhang, John Z. H.;  Wei, Yanjie;  Pan, Yi;  Yang, Yang
收藏  |  浏览/下载：24/0  |  提交时间：2022/12/07
antiviral agent  RdRp  compound specificity estimation  virtual screening  tubeimoside III  
Reconstruction of Full-Length circRNA Sequences Using Chimeric Alignment Information 期刊论文
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2022, 卷号: 23, 期号: 12, 页码: 15
作者:  Hossain, Md. Tofazzal;  Zhang, Jingjing;  Reza, Md. Selim;  Peng, Yin;  Feng, Shengzhong;  Wei, Yanjie
收藏  |  浏览/下载：19/0  |  提交时间：2022/12/07
circular RNA  reconstruction of circRNA sequence  full-length sequence  
Identification of circRNA Biomarker for Gastric Cancer through Integrated Analysis 期刊论文
FRONTIERS IN MOLECULAR BIOSCIENCES, 2022, 卷号: 9, 页码: 13
作者:  Hossain, Md. Tofazzal;  Li, Song;  Reza, Md. Selim;  Feng, Shengzhong;  Zhang, Xiaojing;  Jin, Zhe;  Wei, Yanjie;  Peng, Yin
收藏  |  浏览/下载：21/0  |  提交时间：2022/12/07
gastric cancer  circular RNA  computational approach  circRNA biomarker  circRNA-miRNA-gene interaction  
Evaluation of CircRNA Sequence Assembly Methods Using Long Reads 期刊论文
FRONTIERS IN GENETICS, 2022, 卷号: 13, 页码: 12
作者:  Zhang, Jingjing;  Hossain, Md. Tofazzal;  Liu, Weiguo;  Peng, Yin;  Pan, Yi;  Wei, Yanjie
收藏  |  浏览/下载：20/0  |  提交时间：2022/12/07
circRNA  full-length sequences  short reads  long reads  assembly  
A novel protein AXIN1-295aa encoded by circAXIN1 activates the Wnt/beta-catenin signaling pathway to promote gastric cancer progression 期刊论文
MOLECULAR CANCER, 2021, 卷号: 20, 期号: 1, 页码: 19
作者:  Peng, Yin;  Xu, Yidan;  Zhang, Xiaojing;  Deng, Shiqi;  Yuan, Yuan;  Luo, Xiaonuan;  Hossain, Md Tofazzal;  Zhu, Xiaohui;  Du, Kaining;  Hu, Fan;  Chen, Yang;  Chang, Shanshan;  Feng, Xianling;  Fan, Xinmin;  Ashktorab, Hassan;  Smoot, Duane;  Meltzer, Stephen J.;  Hou, Gangqiang;  Wei, Yanjie;  Li, Song;  Qin, Ying;  Jin, Zhe
收藏  |  浏览/下载：33/0  |  提交时间：2022/06/21
AXIN1  Wnt  Translation  circRNA  
Editorial: Computational Learning Models and Methods Driven by Omics for Precision Medicine 期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 11, 页码: 4
作者:  Zhu, Lei;  Cai, Hongmin;  Zhang, Fa;  Zou, Quan;  Wei, Yanjie;  Zheng, Huiru
收藏  |  浏览/下载：30/0  |  提交时间：2021/12/01
omics  machine learning  drug  RNA  disease  biomarker  network analysis  deep learning