pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry

doi:10.1093/bioinformatics/bti439

	pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry
	Li, DQ ; Fu, Y ; Sun, RX ; Ling, CX ; Wei, YG ; Zhou, H ; Zeng, R ; Yang, Q ; He, SM ; Gao, W
	2005-07-01
发表期刊	BIOINFORMATICS
ISSN	1367-4803
卷号	21 期号:13 页码:3049-3050
摘要	Research in proteomics requires powerful database-searching software to automatically identify protein sequences in a complex protein mixture via tandem mass spectrometry. In this paper, we describe a novel database-searching software system called pFind (pepticle/protein Finder), which employs an effective peptide-scoring algorithm that we reported earlier. The pFind server is implemented with the C++ STL,.Net and XML technologies. As a result, high speed and good usability of the software are achieved.
DOI	10.1093/bioinformatics/bti439
收录类别	SCI
语种	英语
WOS研究方向	Biochemistry & Molecular Biology ; Biotechnology & Applied Microbiology ; Computer Science ; Mathematical & Computational Biology ; Mathematics
WOS类目	Biochemical Research Methods ; Biotechnology & Applied Microbiology ; Computer Science, Interdisciplinary Applications ; Mathematical & Computational Biology ; Statistics & Probability
WOS记录号	WOS:000230255400016
出版者	OXFORD UNIV PRESS
引用统计	被引频次：129[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://119.78.100.204/handle/2XEOYT63/10172
专题	中国科学院计算技术研究所期刊论文_英文
通讯作者	Li, DQ
作者单位	1.Chinese Acad Sci, Inst Comp Technol, Beijing 100080, Peoples R China 2.Chinese Acad Sci, Grad Sch, Beijing 100039, Peoples R China 3.Univ Western Ontario, Dept Comp Sci, London, ON, Canada 4.Chinese Acad Sci, Shanghai Inst Biol Sci, Inst Biochem & Cell Biol, Shanghai 200031, Peoples R China 5.Hong Kong Univ Sci & Technol, Dept Comp Sci, Hong Kong, Hong Kong, Peoples R China
推荐引用方式 GB/T 7714	Li, DQ,Fu, Y,Sun, RX,et al. pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry[J]. BIOINFORMATICS,2005,21(13):3049-3050.
APA	Li, DQ.,Fu, Y.,Sun, RX.,Ling, CX.,Wei, YG.,...&Gao, W.(2005).pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry.BIOINFORMATICS,21(13),3049-3050.
MLA	Li, DQ,et al."pFind: a novel database-searching software system for automated peptide and protein identification via tandem mass spectrometry".BIOINFORMATICS 21.13(2005):3049-3050.